KEGG   Sinorhizobium fredii USDA 257: USDA257_c29200
Entry
USDA257_c29200    CDS       T02188                                 
Symbol
virB4
Name
(GenBank) type IV secretion system protein VirB4
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    USDA257_c29200 (virB4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfd02044]
    USDA257_c29200 (virB4)
Enzymes [BR:sfd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     USDA257_c29200 (virB4)
Secretion system [BR:sfd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   USDA257_c29200 (virB4)
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 ATPase_2 FtsK_SpoIIIE AAA_16 T2SSE NPHP3_N ABC_tran TrwB_AAD_bind cobW AAA_24 RsgA_GTPase PMT2_N
Other DBs
NCBI-ProteinID: AFL51491
UniProt: I3X6I5
LinkDB
Position
3062708..3065089
AA seq 793 aa
MPSLTTLRSRELAPETFIPYVRHVDESTIALDSRALMVMIALEGVAFETADVLDLNALHR
DLNTLYRNIADERLALWTHLIRRRDSDYPEGTFATAFSAALNDKYRARMVGEDLFRNDLY
LTILWSPARDPADKAAKLLSRLRRARRAGAELDEEALKHLRDKVVDVTAALKRFEPRVLS
LYEHDGLLFSEPSELLHQFVGGRREPIPLTEGRIASAIYSDRVIVGRETVEIRPEAESRY
AGMLSFKEYPARTRTGMLDGVLTSPFELILAQSFSFVSKADARTIMGRKQNQMVSSGDKA
ASQIDELDEAMDDLESNRFVLGEHHLSLCVFASSVKELTDNLAKARASLTSGGAVVARED
LGLEAAWWAQLPGNFRYRARSGAISSRNYAALSPFHSYPIGQKDGNEWGPAVALLKTASG
SPYYFNFHYGDLGNTFVCGPSGAGKTVLLNFMLSQLEKHDPHVVFFDKDRGADLYIRAAG
GTYLPLKNGIPTGCAPLKALELTPENKVFLTRWVGKLAGSPTRELTVTELRDIASAIEGL
ADLPVERRTIGALRTFLDNTNPEGIAARLRRWETGGPLGWVFDNVIEDIGFGEFGDGGTF
VGYDMTDFLDNEEIRAPLMAYLFYRVEQLIDGRRIIIVIDEFWKALQDEGFRDLAQNKLK
TIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNARGNRADYVDGFKLTEREYE
LIARELSVESRRFVLKQGHNSVVAELNLSGFGDELAILSGRTANVELADAVRAEVGNRRE
DWLPVFQQRRSAS
NT seq 2382 nt   +upstreamnt  +downstreamnt
ttgcctagcctgaccacactcagatctcgcgaactcgctccggagaccttcatcccctat
gtccgccacgtcgacgagtcgacgatcgcgctcgattcccgggcgctgatggtgatgatc
gcgctcgaaggcgtcgcgttcgagaccgcggatgttctcgacctgaatgccctccatcgc
gacctcaacacgctctaccgcaacatcgccgacgagcggctcgccttgtggacgcatctt
attcgccgccgggacagcgactatcccgagggcaccttcgcgactgccttctcggccgcg
ttgaacgacaaataccgcgcgcgcatggtgggcgaggacctgtttcgcaacgacctctat
ctgaccatcctctggtcaccggcacgcgatccggcagacaaggcggcaaagctgctgtcg
cgcctgcgccgagcccgtcgcgcaggggcggaactcgacgaggaggccctcaagcacctt
cgcgacaaggtcgtcgatgtcacggcggctttgaaacgcttcgagccccgcgtgctgtcc
ctctacgaacacgacggcctgttgttctcggagccgagcgaactgctgcatcagttcgtc
ggcggacgacgcgagccgatccccctgaccgagggccgcattgcgtcggcgatctactcg
gatcgtgtcatcgtcggccgcgagacggtcgagatccgccccgaagcagaaagccgctat
gccggcatgctgagtttcaaggaatatccggcccgcaccaggaccggcatgctcgacggc
gtgcttaccagtcctttcgaactgatcctggcgcaatccttctccttcgtctcgaaagcc
gacgcgcgcaccatcatgggccgcaagcagaaccagatggtcagcagcggcgacaaggcg
gcatcgcagatcgacgaactcgacgaggccatggacgatctggagtccaaccggttcgta
ctcggcgagcatcatctctcgctttgcgtctttgcttcctcggtgaaggaactgaccgac
aatctcgccaaggcgcgcgccagcttgacgagcggcggcgccgtcgttgcgcgcgaggac
cttggtctcgaggcggcctggtgggcgcagttgcccggcaatttccgctatcgcgcccgg
tccggagcgatctcgtcgcgaaactacgcggcgctgtcgcccttccactcctatccgatc
ggccagaaggacggcaatgaatggggccccgccgtcgcgctgctcaagaccgcgtccggc
tcgccatattacttcaatttccattacggcgatctcggaaacacgttcgtctgcggcccg
tcgggcgccggcaagacggtgctactcaacttcatgctgtcgcagctcgaaaagcacgat
ccgcatgtggtgttcttcgacaaggacaggggagccgatctctacatacgcgccgccggc
ggcacctatctgccgctgaagaacggtatcccgaccggctgcgctcccttgaaggccctc
gaattgacgccggagaacaaggtgttcctgacgcgctgggtcggcaagcttgccggttcg
cccacgcgggaactgaccgtgaccgaacttcgcgacattgcctccgccatcgaaggcctc
gccgacctgccggtggagcgccggacgatcggcgcgctcaggacttttttggacaacacg
aacccggaagggatcgctgctcggctgcgtcgctgggagacgggagggccgctcggctgg
gtcttcgataatgtaatcgaggacatcggcttcggtgaatttggcgatggtggcacgttt
gtcggctacgacatgaccgatttcctcgataacgaggaaatccgtgcccccctgatggcc
tatctcttctatcgcgtcgagcaactgatcgatggtcgcaggatcatcattgtgatcgac
gagttctggaaagcgctccaggacgaaggcttccgcgatcttgcccagaacaagctcaag
acgatccgaaagcagaacggcctcatgctgtttgccacgcagagcccgcgcgacgcgatc
gtctcgccgatcgcccacaccatcatcgaacaatgcccgacgcagatcttcctgccgaac
gcgcgcggcaaccgcgccgactatgtcgacggcttcaagctcacggagcgcgaatacgag
ctgatcgcacgcgagctctccgtcgagagtcggcggttcgtgttgaagcagggacacaac
agcgtcgtcgccgaactgaacctcagcggtttcggcgacgaactcgccattctctccggc
cggactgccaatgtggagcttgccgacgcggtccgcgccgaagtcggcaaccggcgagag
gactggcttcccgttttccagcaaagaaggagtgcgagctga

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