Sinorhizobium fredii USDA 257: USDA257_c29810
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Entry
USDA257_c29810 CDS
T02188
Name
(GenBank) uncharacterized protein y4xJ
KO
K02280
pilus assembly protein CpaC
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
USDA257_c29810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfd02044
]
USDA257_c29810
02035 Bacterial motility proteins [BR:
sfd02035
]
USDA257_c29810
Secretion system [BR:
sfd02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
USDA257_c29810
Bacterial motility proteins [BR:
sfd02035
]
Pilus system
Pilus assembly proteins
USDA257_c29810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
MarR
KN_motif
Motif
Other DBs
NCBI-ProteinID:
AFL51551
UniProt:
I3X6P5
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Position
complement(3125537..3127015)
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AA seq
492 aa
AA seq
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MRNRAARAGTLAAVAAALIAYGGWGPGLVGPADAQEKFISLTGSVQQVTIAPNDTVTIRT
GKVFGDLVIGSAEMIDVVPLSDQSLFIRGKQTGATNISVYDDNKSLIGVIDIRVAADFSE
VASAIRSTAPSARVRVFNSNDRIRLTGTVRDAVELQRVIEIAQSYSETPVLNQLRVADSQ
QVMLEVRVIEASRQTGRDLGIGWSGQGRNGIGKATTSQGISVNDDGALVRTLEDAAGAAT
GMQPFGQLIAKVLEISGGQIDIVINALEQKGLVRRLAQPNLIAMSGETASFHAGGEVPIQ
STVANGATLATETDYRPFGVRLTFSPVVLDGGLISLKIEPEVSELDTSINVNGNPGFISR
AASTTVALRDGQSFAMAGLLQSVNAKDVQQLPWLGQVPVIGALFRSTSFLKRESDLVIVV
TPHIVRPSTPGEDLYSPLEQTRSSNDVELFALGILEVDKDMLRRFRNGEGVKGPYGHRLD
LDVGGAVVLSKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacagggcggcaagagccggaaccctggcggcggtagccgcggcgctaattgct
tatggtggttggggaccgggtctggttggccccgccgatgcccaggaaaaattcatcagc
ctgaccggctcggtccaacaggtgacgatcgcgccaaacgatacggtaacgatcaggacc
ggcaaggtctttggcgacctggtgatcggcagcgccgagatgatcgacgtggtgccactt
tccgatcaatcgctgttcatccgcgggaagcagacaggcgcgacgaacatctccgtctac
gacgacaacaagtccttgatcggcgtgatcgatattcgcgtcgccgccgatttcagcgaa
gtggcatctgcgatccgctccaccgcaccttcagcacgggttcgggtattcaattccaat
gatcgcatccgattgaccggcacggtccgcgacgccgtcgagctgcagcgggttatcgag
atcgcccagtcctattccgaaacaccggtgctgaaccagttgcgtgttgccgactcgcag
caggtgatgctggaggttcgggttatcgaggcgtcccgccagaccggccgcgacctcggt
atcggctggtccggccaaggccggaacggcatcggcaaggcgacgaccagtcaaggcatc
tcggtcaatgacgacggcgcgcttgtccgaacacttgaggatgctgcaggtgccgcgacc
ggtatgcagcccttcggtcagctgatcgccaaggtgctggagatttccggcggccagatc
gacatcgtcatcaacgcgctggagcaaaagggcctggtgcgccggttggcgcagccgaac
ctcatcgccatgagtggcgaaaccgcaagcttccacgccggcggcgaggtgccgatccaa
tcaacggtcgcgaacggtgcgacgcttgcgaccgagaccgactaccggcctttcggcgtg
cggctcaccttctcgcccgtggtgctcgatggcggcctgatcagtctcaagatcgagccc
gaagtctctgaactcgacacctcgatcaacgtcaacggcaatcccggcttcatctcgcgc
gcggcaagcacgacagtcgcgctgcgtgacggccagagctttgcgatggcaggcctgctt
caatccgtcaatgcaaaggacgttcagcaattgccatggctgggacaggttccggtgatc
ggcgcgctgtttcgctcgacgagtttcttgaaaagggagtcggacctcgtcatcgtcgtt
accccgcatatcgtgcggccgtcgacgccaggcgaagacctttacagcccgctcgaacag
acgcgttcgtcaaatgacgtcgagctcttcgcgctcggtatcctcgaggtggacaaggac
atgctgcgccgcttccgcaatggcgaaggcgtgaaagggccgtatggccatcgtctcgat
ctcgacgtgggaggcgcagttgtcctttccaagaaataa
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