Sinorhizobium fredii USDA 257: USDA257_c30470
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Entry
USDA257_c30470 CDS
T02188
Symbol
glgX1
Name
(GenBank) glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00500
Starch and sucrose metabolism
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
Module
sfd_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
USDA257_c30470 (glgX1)
Enzymes [BR:
sfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
USDA257_c30470 (glgX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
DUF3459
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AFL51617
UniProt:
I3X6W1
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All DBs
Position
3198360..3200714
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AA seq
784 aa
AA seq
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MRRTARSSGAHRRKCASSPEVRSAPQVFRTRLCIRLSLAAVEIGKRRKLPGCVESSAAPV
RCRGSAGTKLPPSALPPHFQDAAGGATTRMNVAFSELDFLKPELGAEYTGQGTHFAIFSA
HAEKIELCLFSEDGSKETARLPLPKREGDIWSGYIEGLGPGTLYGYRAYGPYDPHNGHRF
NPNKLLLDPYAKQVAGEFVWDDALFGYTIGSQEGDLSFDERDSAPYMVKGVVQDPNFDWA
GEEAIRRPWTETIIYETHLRGMTMTHPDVPDELRGTFLGMASDPIIDHLMKLGVSAVELL
PVQYFLDDRYLTERSLRNYWGYQPLGYFAPHARYLKGTRITEFKTMVKRFHAAGIEVLMD
VVYNHTAEGSEQGPTLSFRGLDNLSYYRQSPEQPRHTYDMTGTGNTLNVAHPMVLRMVLD
SLRYWVGVMHIDGFRFDLASALGREYMEFDREGGFLDAIRQDPILAGVKLIAEPWDIGDG
GYQLGGFPPPFREWNDRFRDDIRRFWKGDGGVVPVLAERLAGSPVQFNHSGRAATSSVNL
LSAHDGFTLMDTVSYAGKHNEANGEDNHDGHSDNHSDNMGAEGPTDDPEIEQARRRRRFA
MLATLMVSQGVPMVLGGDELGNSQSGNNNAYCQDNEIGWLDWSRSDDALLAFCRKMIAFR
REHPVLRQEYFLEGATDEHGRIEIAWYKPDGSHMDEAAWGDGELRILGLYLCQLSPVEAP
AGEIFLVLNAGGDCEVALPPVHGSECWLWALNTAEEDAFAGSVAHDRETIPAQSVAAFVP
KDPG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaaccgcacgctcgtcgggcgcccacaggcgaaaatgtgcatcatcgccggag
gtcaggtcggcgccccaggtcttccggacacggctgtgcattcgtctttcccttgctgct
gtcgagatcggcaagagacgaaaactgccgggatgcgtcgaaagttccgctgcacccgtt
cgttgccgaggctcggcaggaacaaagttgccgccatcggcgttgccccctcacttccag
gacgctgcagggggcgcgacgacacgaatgaatgtggctttctccgaactcgatttcctg
aagccggagcttggcgccgaatacaccggccagggcacgcatttcgcgatcttttccgcg
catgccgagaagatcgaactttgtctcttttccgaggatggcagcaaggaaacggcccgc
ctgccgctgccgaagcgcgaaggcgacatctggtccggatacatcgaagggctcggccca
gggacgctttacggctaccgcgcctacgggccctatgacccgcataacggccatcgtttc
aacccgaacaagctgctcctcgatccttatgccaagcaggtggccggtgagttcgtctgg
gacgacgcgctgttcggctacacgatcggcagccaggagggcgacctttccttcgacgag
cgcgatagcgccccatacatggtcaagggcgtcgttcaggatccgaacttcgactgggcc
ggcgaagaggcgatccgccggccctggacggagacgatcatctacgagacccaccttcgc
ggcatgaccatgacgcatccggacgtgccggacgaattgcgcggcaccttcctcggcatg
gcaagcgacccgatcatcgatcatctgatgaagctcggcgtctcggcggtcgagcttctg
ccggtgcaatatttcctcgacgaccgctacctcaccgagcgaagcctcaggaactattgg
ggttaccagccgctcggctatttcgcgccgcatgcccgctacctgaagggcaccaggatc
accgagttcaagacgatggtgaagcgcttccatgccgccggcatcgaggttctgatggac
gtcgtctacaaccacaccgccgaaggttcggagcaggggccgaccctcagcttccgcggc
ctcgacaatctcagctattaccgccagtcgccggagcagccccgacatacttatgacatg
accggcaccggcaatacgctgaacgtggcgcatcccatggtgctgcgcatggtgctcgat
agcctccgttattgggtgggcgtcatgcacatcgacggtttccgcttcgatctcgcgagt
gcccttgggcgcgaatacatggagttcgaccgggaaggcgggttcctcgatgcgatcagg
caagatccgatcctggccggcgtcaagctgatcgccgaaccttgggatatcggcgacggc
ggctaccagctcggcggttttccgccgcccttccgtgagtggaacgatcgcttccgcgac
gatatccggcgcttctggaaaggagatggcggcgttgtgccggtgcttgccgaacggctc
gccggctcaccggtccagttcaaccattccggccgcgccgcaacaagctccgtcaacctt
ttgagtgcgcatgacggcttcacgctgatggatacggtttcctacgctggaaagcacaac
gaggcgaacggcgaggacaatcatgacggccactcggacaatcactccgacaatatgggt
gccgaggggccgaccgatgaccccgagatcgagcaggcgcgtcggcgccgccgctttgcc
atgcttgccaccctgatggtgagccaaggcgttccgatggtcctcggcggcgacgagctc
ggcaacagccagagcggaaacaacaatgcctattgccaggacaacgagatcggctggctt
gattggagccggtcggacgacgccctcctcgccttctgccgcaaaatgatcgctttccgg
cgggagcacccggtgctgcgtcaggagtacttcctggaaggtgccacggacgagcacgga
cgcatcgagatcgcctggtataagcccgacggcagccacatggatgaggcggcatggggt
gatggcgaattgcgcatcctcggtctctatctctgccagctctcccctgtcgaggcgccg
gcgggggagatattcctcgtcctcaacgccgggggcgactgcgaagtagcgctgccccct
gtgcacggttcggaatgctggctgtgggcgctcaacacggccgaggaagatgcctttgcc
gggtccgttgcccacgatcgggaaacgatccccgcgcagagcgttgccgctttcgttccg
aaagaccccgggtaa
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