Sinorhizobium fredii USDA 257: USDA257_c32890
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Entry
USDA257_c32890 CDS
T02188
Symbol
hupB
Name
(GenBank) DNA-binding protein HRm
KO
K03530
DNA-binding protein HU-beta
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfd03032
]
USDA257_c32890 (hupB)
03036 Chromosome and associated proteins [BR:
sfd03036
]
USDA257_c32890 (hupB)
03400 DNA repair and recombination proteins [BR:
sfd03400
]
USDA257_c32890 (hupB)
DNA replication proteins [BR:
sfd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
USDA257_c32890 (hupB)
Chromosome and associated proteins [BR:
sfd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
USDA257_c32890 (hupB)
DNA repair and recombination proteins [BR:
sfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
USDA257_c32890 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFL51856
UniProt:
I3X7K0
LinkDB
All DBs
Position
3458570..3458842
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AA seq
90 aa
AA seq
DB search
MNKNELVSAVAEKAGLSKADASSAVDAVFETIQGELKSGGDIRLVGFGNFSVSRREASKG
RNPSTGAEVDIPARNVPKFTAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatgagctcgtgtctgccgttgcggagaaggccggactttccaaggccgat
gcgtcttccgctgttgacgcagtgtttgagaccattcagggcgaactgaagagcggtggc
gacattcgtctcgtcggcttcggcaacttctccgtgagccgtcgcgaagcgagcaagggc
cgcaacccgtcgacgggtgcggaagttgacatcccggcgcgcaacgtgccgaagttcacg
gccggcaagggcctgaaggacgccgtcaactaa
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