Sinorhizobium fredii USDA 257: USDA257_c34140
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Entry
USDA257_c34140 CDS
T02188
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
USDA257_c34140 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfd03021
]
USDA257_c34140 (rpoA)
03400 DNA repair and recombination proteins [BR:
sfd03400
]
USDA257_c34140 (rpoA)
Enzymes [BR:
sfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
USDA257_c34140 (rpoA)
Transcription machinery [BR:
sfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
USDA257_c34140 (rpoA)
DNA repair and recombination proteins [BR:
sfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
USDA257_c34140 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
AFL51974
UniProt:
I3X7W8
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All DBs
Position
3583228..3584280
Genome browser
AA seq
350 aa
AA seq
DB search
MPRLDGGNERKAENMIQKNWQELIKPNKVDFTSSGRTRATLVAEPLERGFGLTLGNALRR
VLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQ
GPGVVTAGDIQTVGDIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPAERNRSEDAPIG
LIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLS
VFVNFDEPQKETEEEAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEA
EMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgccacgattggatggtggcaacgaacggaaggcagaaaacatgatccagaaaaattgg
caggaattgatcaagccgaacaaggtggatttcacctcctcgggccgcaccagggcaacg
ctggtggcggaaccgcttgagcgcggcttcggtctgaccctcggcaacgcgcttcgtcgc
gtgcttctgtcgtcgctgcgcggtgctgccgtcaccgcagtgcagatcgacggcgtgctg
cacgagttctcctcgatcccgggcgtccgggaagacgtgacggacatcgtgctcaacatc
aaggaaatcgccatcaagatggatggcgacgattccaagcgcatggtcgtgcgcaagcag
ggtccgggcgtcgttacggccggcgatatccagacggttggcgatatcgagatcctcaac
ccgaaccatgtgatctgcaccctcgacgagggcgcggaaattcgcatggagttcaccgtc
aacaacggcaagggctacgtgccggccgagcgtaaccgctcggaagatgcgccgatcggt
ctcattccggtcgatagcctttattcgccggtcaagaaggtgtcctacaaggttgagaac
acgcgcgaaggccaggttctcgactatgacaagctgacgatgtccatcgagaccgatggc
tccgtcaccggcgaagacgcgatcgcgtttgccgcccgcattcttcaggaccagctgtcg
gtcttcgtcaatttcgacgagccgcagaaggaaacagaggaagaggcagtcaccgagctc
gccttcaacccggcgcttctcaagaaggtcgacgaactggaactctcggtccgttcggcc
aactgcctgaagaacgacaacatcgtctatatcggcgaccttattcagaagaccgaagcg
gaaatgctccggacgccgaactttggtcgcaagtcgctcaacgagatcaaggaagttctc
gcttccatgggcctgcacctcggcatggaagtgccgtcctggccgccggagaacatcgaa
gatctcgccaagcgatacgaagaccaatactaa
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