KEGG   Sinorhizobium fredii USDA 257: USDA257_c34680
Entry
USDA257_c34680    CDS       T02188                                 
Symbol
gyrB1
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sfd  Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfd03032]
    USDA257_c34680 (gyrB1)
   03036 Chromosome and associated proteins [BR:sfd03036]
    USDA257_c34680 (gyrB1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sfd02048]
    USDA257_c34680 (gyrB1)
Enzymes [BR:sfd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     USDA257_c34680 (gyrB1)
DNA replication proteins [BR:sfd03032]
 Prokaryotic type
  DNA Topoisomerases
   USDA257_c34680 (gyrB1)
Chromosome and associated proteins [BR:sfd03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    USDA257_c34680 (gyrB1)
Prokaryotic defense system [BR:sfd02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    USDA257_c34680 (gyrB1)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 HATPase_c_2
Other DBs
NCBI-ProteinID: AFL52027
UniProt: I3X821
LinkDB
Position
complement(3631086..3633119)
AA seq 677 aa
MPLQPKPADTAAPRKPAAPAAGNDASRPAPRNSDGSDYDASAIEVLEGLEPVRRRPGMYI
GGTDEKALHHLFAEVIDNSMDEAVAGHANFIEVNLDADGFLTVTDNGRGIPVENHPKFPN
KSSLEVVMTILHAGGKFDGKAYETSGGLHGVGVSVVNALSDSLEVEVARNRKLYRQRFSR
GIPQGELEELGEVHNRRGTRVRFHPDPQIFGPHARFEPARLFRMARSKAYLFGGVEIRWS
CDPALLLEGSETPDKAVFHFPGGLKDYLAATLGKEFTVTREIFSGKSEKAGGHGSLEWAV
TWYGGDQQIHSYCNTIPTPEGGTHEAGLRIALTKGLKNYAELTQNKRAAIVTTDDVMISA
AGMLSVFIREPEFVGQTKDKLATVEAQRIVENALRDPFDHYLADNPAEAAKLLDWVVERA
EERVRRRKEKEVNRKTAVRKLRLPGKLADCAQNTAEGAELFIVEGDSAGGSAKQARNRAN
QAILPLRGKILNVASAGREKLGANQQIADLVQALGCGTRSKYREEDLRYERVVIMTDADV
DGAHIASLLITFFYQEMPELIRGGHLYLAVPPLYRLSQGSKTLYARDDAHREELMRTEFN
GRGKVEIGRFKGLGEMLPAQLKETTMDPANRTLLKVEIDDVDFEGTREAVDNLMGTKADA
RFRFIQERAVFADNLDI
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgcctttgcagccgaagccggccgataccgccgcgccgcgcaagccggccgcgcctgcc
gccggcaacgatgcatcgcggccggcgccccgcaacagcgacggcagcgactacgacgcg
tccgcgatcgaggtcctcgaggggctggaaccggtgcgtcgccggccgggcatgtatatc
ggcggaacggacgagaaggcgctgcaccatctctttgccgaggtgatcgacaactcgatg
gacgaggccgtcgccggccacgcgaacttcatcgaagtgaacctcgacgccgacggcttc
ctgacggtgaccgacaacggccgcggcattccggttgaaaatcacccgaagttccccaat
aaatcgagcctcgaagtggtgatgacgatcctgcatgccggcggcaagttcgacggcaag
gcgtacgagacctcgggcggtctgcatggcgtcggcgtctccgtcgtcaacgcgctgtcg
gactcgctcgaggtcgaggtggcgcgaaaccgcaaactctaccgccagcgcttctcccgc
ggcattccgcagggtgaacttgaagaactcggcgaggtgcacaatcgccgtggtacgagg
gtccgcttccatccggacccgcaaatcttcggtccgcatgcccgcttcgagccggcgcgg
ctcttccgcatggcccgctccaaggcctatctcttcggcggtgtcgaaatccgctggtcc
tgcgatccggcattgctgctggaaggttcggagactcccgacaaggccgtgttccatttc
cccggcggcctcaaggactacctagccgcgacgctcggcaaggaattcaccgtcacccgc
gagatcttctccggcaaatcggaaaaggccggcggccacggctcgctcgaatgggcggtc
acctggtatggcggcgatcagcagatccactcctattgcaacacgatccctacgccggaa
ggcggcacgcacgaggccggactgcgcatcgcgctgaccaagggcctgaagaactacgcg
gagctcacccagaacaagcgggccgcaatcgtgaccaccgacgacgtgatgatctcggcg
gcaggcatgctctcggtcttcattcgcgaaccggaattcgtcggccagacgaaagacaag
ctggcgacggtcgaggcgcagcgcatcgtcgaaaacgcgcttcgagaccccttcgaccat
tacctcgccgacaatccggccgaagccgcaaaacttctcgactgggtcgtcgagcgcgcc
gaagagcgcgtccgccggcgcaaggaaaaggaagtcaaccgcaagactgcggtgcgcaaa
ctgcgcctgccaggcaagctggccgactgtgcgcagaacacggcggaaggcgcggagctt
ttcatcgtcgagggcgattcggcaggcggctcggccaagcaggcgcgcaaccgcgccaat
caggcgatcctgcccctgcgaggcaagatcctgaacgtcgccagcgccggccgcgagaag
ctcggcgccaaccagcagatcgccgatctcgtccaggcgctcggctgcggcacgcggtcg
aagtaccgcgaggaggatctccgctatgagcgcgtcgtcatcatgaccgacgcggacgtc
gacggcgcacatatcgcctcactgctgatcaccttcttctatcaggagatgccggaactc
attcgcggcggccacctctatctcgccgtgccgccgctttaccggttgagccaaggatca
aagacgctttatgcccgcgacgacgcgcatcgcgaagagctgatgcgcaccgagttcaac
ggccgcggcaaggtcgagatcggtcggttcaagggtctcggcgagatgctgcccgctcag
ctcaaggaaacgaccatggatccggccaaccggaccctgctcaaggtggagatcgacgac
gtcgatttcgagggcacgcgcgaagccgtcgacaacctgatgggaacgaaggccgatgcc
cggttccgcttcatccaggagcgcgccgtctttgcggacaatctggatatctga

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