Sinorhizobium fredii USDA 257: USDA257_c34820
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Entry
USDA257_c34820 CDS
T02188
Symbol
pdhB
Name
(GenBank) pyruvate dehydrogenase E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00010
Glycolysis / Gluconeogenesis
sfd00020
Citrate cycle (TCA cycle)
sfd00620
Pyruvate metabolism
sfd00785
Lipoic acid metabolism
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
sfd01120
Microbial metabolism in diverse environments
sfd01200
Carbon metabolism
sfd01210
2-Oxocarboxylic acid metabolism
Module
sfd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
USDA257_c34820 (pdhB)
00020 Citrate cycle (TCA cycle)
USDA257_c34820 (pdhB)
00620 Pyruvate metabolism
USDA257_c34820 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
USDA257_c34820 (pdhB)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
USDA257_c34820 (pdhB)
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
PFOR_II
Biotin_lipoyl_2
Gp77
QRPTase_N
GCV_H
Transketolase_C_1
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
AFL52041
UniProt:
I3X835
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All DBs
Position
3645210..3646577
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AA seq
455 aa
AA seq
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MPVEILMPALSPTMEEGTLSKWLKNEGDKVSSGDVIAEIETDKATMEVEAVDEGTIGKLL
IAAGTEGVKVNTPIAVLLQDGEAAGDIATAKTEAPKPAAVEAPAPAAAPVAAQPKAEIPA
DPAIPAGTEMVTITVREALRDAMAEEMRADDNVFVMGEEVAEYQGAYKITQGLLQEFGPR
RVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGA
PIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFL
ENEILYGQSFEVPKLNDFVLPIGKARIHRVGKDVTVVSFGIGMTYAVKAAAELESQGIDV
EVIDLRTIRPMDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILT
IAGKDVPMPYAANLEKLALPNVAEVVDAVKAVCYK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaattctcatgcctgccctttccccgacgatggaggaaggcacgctttcc
aagtggctgaagaacgagggcgacaaggtgtcctccggcgacgtcatcgccgagatcgag
accgacaaggcgacgatggaagtcgaagccgtcgacgaagggacgatcggcaagctgctg
atcgccgccggcaccgaaggcgtcaaggtcaatacgccgatcgccgtgctgctccaggac
ggcgaggccgccggcgatatcgccactgccaagacggaagcgccgaagccggcagcggtc
gaggctccggcgccggccgctgcccccgtcgcggctcagccgaaggccgaaattcccgcc
gatccggcgattccggccggaaccgaaatggtcacgatcacggtccgcgaagcgctccgc
gatgccatggccgaagaaatgcgcgccgatgacaacgtcttcgtcatgggcgaggaggtc
gccgaataccagggcgcctacaagatcacccaagggttgctgcaggagttcggcccgcgc
cgggtcgtcgacacgccgatcaccgagcatggcttcgccggcgttggcgtcggcgcggcg
atgacgggcctgcgcccgatcgtcgaattcatgacgttcaacttcgccatgcaggcgatc
gaccagatcatcaactccgccgccaagacgctctatatgtccggcggccagatgggcgcg
ccgatcgtcttccgcgggccgagcggtgctgcggcccgcgtcgccgcccagcactcgcag
tgctatgccgcctggtacagccacattcccggcctgaaggtcgtcatgccctacacggcg
gcggatgcgaagggcctgttgaaggccgcgatccgcgatccgaaccccgtcatcttcctc
gaaaacgaaatcctctacggccagtcgttcgaagtgccgaaactcaacgatttcgtcctg
ccgatcggcaaggcgcgtattcatcgcgtcggcaaggacgtgacggtcgtctccttcggc
atcggcatgacctatgcggtcaaggccgcagccgagctcgagtcacagggcattgatgtc
gaagtcatcgaccttcgcaccatccgcccgatggacctgccgaccgtcatcgaatccgtc
aagaagaccggtcgcctcgtcaccgtcgaggaaggctacccgcagtcctccgtcggcacc
gagatcgccacccgcgtcatgcagcaggccttcgattatctcgatgcgccgatcctgacg
atcgccggcaaggacgtgccgatgccctatgcggccaaccttgaaaagcttgctctgccg
aacgtcgccgaggtcgtcgatgcggtgaaagccgtctgctacaaataa
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