Sinorhizobium fredii USDA 257: USDA257_c35490
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Entry
USDA257_c35490 CDS
T02188
Name
(GenBank) DNA uptake protein
Organism
sfd
Sinorhizobium fredii USDA 257
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Competence
DUF4131
Motif
Other DBs
NCBI-ProteinID:
AFL52108
UniProt:
I3X8A2
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Position
3710091..3712526
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AA seq
811 aa
AA seq
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MRDTERSAWRLSGPEVVLQTAELPQIKAGQPPSARLDRRFSAGRLRSAAGSIAGLLRSAL
LEEDDFGHGFVLIPVLLALGAILWFSLPETVGIAKLAALLCIFGISASLCRGEMRACRPL
ALAPTLLAAGMLLAALETRRVDTVILDGPVTTNLRGTVLSRQPDDKGRWRYLVEIVRTSG
PKLRRPPEQATLLARSRHEPFPIGSSIEGRVRLSPPSGPALPGLNDFAFDAYFKGVGAVG
FFYGAPRRAEDSADLPLSLQASARLAALREAVGNRIRSAIGGDTGAIAAALITGEERAIS
RETVETLRTAGLSHVLAISGLNMVLAAGTFLIGARTLLSLVPGLAAKRPIKKYAASGALL
MVFLYILISGGAVSALRSWIMISIMLVAVLFDRVSISLRNVALAALIIIVWSPSAVAGPG
FQMSFAATLALVAGYARWRDHRLRNAEAKTSRLSLGQVSGPVVATVATSLIGGLATAVYA
AAHFHRLPAYGLLANVLTTPLIGILIMPFGLFAMLLMPFGLEHYPLMVMGQGLDWMLAVA
RYVAALDGEWVTGRIGVTGFFLLAFGGVLLCVLRTRLAFAGAALILLGGSSIALERQAER
PSITISEDGQLVGLISGDAIATNKARPPEFIFSQWQRALALDNHTAPVETSASGQAPKNG
VDRPARNGAGSQQIDSVASAAKATTALAAAKPGAFSCRKDEWCVGRSQEGWSVAVVDAPD
IFAVLCGRVDLLVAATRRTLPTCSSDKSLVVTGRTLRQTGAVEIYVSAAVSAARPARFRI
VTSFPSTQRPWQQHRRYDWRSDTFASQQAAY
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacacggaacgtagcgcatggcgtctctccggccccgaggtcgtccttcagact
gccgagctcccgcagatcaaggcaggtcaacctccctcggcgaggctcgatcgccgcttt
tctgccggccggctccgatctgcggcgggctccatagctggtcttctgcgctcagcgctg
ctcgaggaagatgacttcggccatggtttcgtgttgattccggtgcttctggcgcttggc
gccattctgtggttttcgctgccagagaccgtcggtattgctaaactcgcagcactgctt
tgcattttcggcatatctgcatcgctgtgcaggggagaaatgcgtgcgtgccggccgctg
gcgctcgcgccaactctcctggcagccggcatgctgctcgccgcgctcgagacgcgccgt
gtcgatacggtcatcctcgatggtccggtgacgacgaacctgcgcgggacggtgctatcg
cgtcagccggacgacaaggggcgatggcgctacctggtcgagatcgtccggacgtccggg
ccgaagcttcgcaggccccccgagcaggcgacgcttttggcacgcagtcgccacgaaccc
ttccccattggctcgagtatcgagggccgggttcgtctctcgccgccctccggtccggcg
ctgccgggtctcaacgatttcgcgttcgatgcctatttcaaaggcgtgggcgccgtcggt
ttcttctacggtgcgccgcgcagggcggaggatagcgccgatctccccctctcattgcag
gcgagcgcccgcctggcggcgttgcgcgaagcggtcggcaatcggattcgctcggcgatc
ggcggggataccggcgccatcgctgcagcactgatcaccggcgaggaacgtgccatcagt
cgcgaaaccgtcgagacgttgcggaccgccgggctttcgcatgtgcttgcgatctccggg
ctcaacatggtgctggcggccggcaccttcctcatcggcgcgcgaacgctgctgagcctg
gtccccggccttgcggcgaagcggccgatcaagaaatatgcagcgtcgggcgcgctgctg
atggttttcctctacatcctgatttccggcggcgcggtgtcggccctcagatcctggatc
atgatctcgatcatgctcgtcgccgtccttttcgaccgcgtctcgatcagcctgcgcaat
gtcgcgcttgccgcgctcatcatcatcgtgtggtcgccctcggcagtcgccggtcccggc
tttcagatgtcctttgctgcgaccctggcgctcgtggccggctacgcccgctggcgcgac
catcggctgcggaacgcggaggccaagacgtctcgactgagcctcggccaagtctccggt
ccggtcgtcgccaccgtcgcgacatcgctgataggcggcctggccactgccgtctatgcc
gcagcgcatttccaccgcctgccggcatacggcctgctggcgaatgtgctcacgacgcca
ttgatcggcattctcatcatgccgttcggcctctttgccatgctgctcatgcccttcggg
ctcgaacattaccccttgatggtgatggggcaggggctggattggatgcttgccgtcgcg
cgctatgtagcggcgctcgatggtgagtgggtcaccggtcggatcggcgtcacaggcttt
ttcctgctcgctttcggcggcgtgttgctctgcgtgctgaggacccgtctcgctttcgcc
ggtgccgcactgatccttctgggcgggtcatccatcgcgctggaacgccaggcggaacga
ccctcgatcacgatatccgaggacggccagttagtcggtctgatctccggcgacgcgatc
gctaccaacaaggcacggccgccggagttcatcttctcgcaatggcaacgggcgcttgcc
ctcgacaaccacaccgcgccagtcgagacgtccgcctcaggccaggcccctaagaacggt
gtcgaccgccccgcgcggaatggcgcaggctcgcaacagatcgatagcgtggcgagtgcc
gccaaggcgacgacggccctggctgccgcgaagccaggagccttttcttgccgcaaggac
gaatggtgcgtcggccgcagccaggaaggctggtcggttgccgtggtcgatgcgccggat
atcttcgccgtcctgtgcggccgcgtcgatctgctggtcgcggcaacgcggcggacgttg
ccgacctgttcgtcagataagtcactggtcgtgacgggcaggacattacggcagaccggt
gcggtcgagatttatgttagtgcggctgttagtgcggcgcggcctgcgcgctttcgcatt
gtgacgtcgtttccatcgacgcagaggccttggcagcagcatcgccgctatgactggcgc
agcgacacttttgcctcgcaacaggcggcatactag
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