Sinorhizobium fredii USDA 257: USDA257_c35710
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Entry
USDA257_c35710 CDS
T02188
Symbol
serS
Name
(GenBank) serine--tRNA ligase SerS
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
USDA257_c35710 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfd01007
]
USDA257_c35710 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c35710 (serS)
Enzymes [BR:
sfd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
USDA257_c35710 (serS)
Amino acid related enzymes [BR:
sfd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
USDA257_c35710 (serS)
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
USDA257_c35710 (serS)
Prokaryotic type
USDA257_c35710 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Apolipoprotein
DUF3086
MazG
DUF4047
Baculo_PEP_C
FapA
Motif
Other DBs
NCBI-ProteinID:
AFL52130
UniProt:
I3X8C4
LinkDB
All DBs
Position
3738890..3740173
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AA seq
427 aa
AA seq
DB search
MLDIKWIRENAGVLDSALAKRGAEPLSSSLIALDERRRAILQSLQEMQSRRNTASKEIGA
AMAQKNSELAEKIKAEVAELKDALPAAEEESRQIEAELTDILSRIPNVPLDDVPVGPDES
GNVVKGVVGAKPTWNHKPLEHFEIGEALGFMDFEGAARIAGSRFTILKGQLARLERALGQ
FMLDLHTQEHGYIEVQPPLLVRDDAMYGTGQLPKFAEDLFRTTDERWLIPTAEVPLTNMV
REQILEGEKLPLRFAALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSITDAESSIEEHE
RMTACAEEVLKRLGLHYRVMTLCTGDMGFGARKTYDLEVWLPGQDSYREISSCSVCGDFQ
GRRMNARYRTKEEKGTKFVHTLNGSGVAVGRALIAVIENYLNDDGSVSVPEVLIPYMGGL
RRIEKAA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatatcaaatggattcgtgagaatgctggcgtgctcgacagtgctttggcgaag
cggggcgcggagccgctgtcctcatcgctgatcgcacttgacgagcgccgccgcgcgatc
ctgcagtcgttgcaggagatgcagtcgcgccgcaataccgcctcaaaggaaatcggcgct
gccatggcgcagaagaacagcgagctcgccgaaaaaatcaaggcggaggtcgccgaactc
aaggacgccctgccggccgccgaagaggaaagccggcagatcgaggccgagctcacggat
atcctgtcgcgcattccgaacgttccgctcgatgacgtcccggtcggaccggacgagagc
ggcaatgtagttaagggggtcgtcggcgccaagcccacgtggaaccacaagcctctcgag
catttcgaaatcggcgaggccctgggcttcatggacttcgaaggtgccgcacgcattgcc
ggctcgcgtttcaccattctgaagggtcagcttgcccgccttgagcgcgcgcttggccaa
ttcatgctggatttgcatacgcaggagcacggttacatcgaggtgcagccgccgctgctg
gtccgtgacgatgcgatgtatggcaccggccaactgccgaaattcgcagaagaccttttc
cgcaccacggacgaacggtggctgatcccgacggcggaggttccgctgacgaacatggtg
cgcgaacagatcctcgagggcgagaagctgccgctgcgctttgcggccttgacgccgtgc
ttccgctcggaggcgggttcggccgggcgcgacacgcgcggcatgctgcgccagcaccag
ttcaacaaggtcgaactggtatcgatcaccgatgccgaaagctctatcgaagagcatgag
cggatgaccgcttgcgccgaggaggtgctgaaacggctcggtctccattaccgggtgatg
acgctctgcaccggcgacatgggcttcggcgcacgcaaaacctatgacctcgaagtctgg
ctgccggggcaggatagctatcgcgaaatctcgtcctgctcggtctgcggcgacttccag
gggcgccgcatgaatgcgcgctatcgcacgaaggaagagaaggggacgaagtttgtccac
acgctgaacggttccggagtcgctgtcggccgtgcgctgatcgccgtcatcgagaattac
ctgaacgacgatggctcggtctccgtgcctgaggtcctcatcccctatatgggcggcctg
cgacgcatcgagaaagcggcctga
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