Sinorhizobium fredii USDA 257: USDA257_c35750
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Entry
USDA257_c35750 CDS
T02188
Symbol
ygeR
Name
(GenBank) putative lipoprotein YgeR
Organism
sfd
Sinorhizobium fredii USDA 257
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
Peptidase_M23
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
AFL52134
UniProt:
I3X8C8
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Position
3742696..3744228
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AA seq
510 aa
AA seq
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MRNFSSPSAGKSLIRLCGAVLLASVATGCSSDVSRFNGLFSSSDDITTSSIPGNVPRGDV
SSGQLASSSGSGGGSYGQAFPNSGQSASYDPMSTASTPVSSARAASTPVSVQRTALAEPA
PAAPRQPQAPAARQVQPALATAEPLPSAPKTASNKGGWTTNNAPTIMVRPGDTVAALARR
FGVPEKEILKANGLKSANQVEPGQRLIVPTFGGASSAAKAAASGSIADFEGGKRQPPPLP
AGQREVAILPGQSQSRDKSESRSDVAAGKLNNAGAGDGSDGAYTVKPGDSLNKIAKANGV
SVAALKQANGLTAEGIRVGQKLKMPGAAATATDAVVAASVPAKGETKVASLDQGKPAEYK
PPVAKESVSDVAIRSDVDQESPKSTGISKYRWPVRGAVVAGYGANVDGNRNDGINISVPE
GTPIKAAENGVVIYSGSSLKELGNAVLVRHDDGTVTVYGNASQLKVQRGEKVQRGQTLAA
SGMTGKASQPQVHFEVRKNATPVNPATFLE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatttttcatctcccagtgcagggaagtctttgatccgcctgtgcggggcggtt
ttgctggcaagcgtcgcgaccggttgcagctccgacgtaagccgcttcaacgggctcttt
tcgagttccgacgatattaccaccagttccatcccgggaaatgtaccgcgtggcgatgtt
tctagcggccaactggcctcgtcctccggttccggtggcgggtcttatggccaggctttc
ccgaactccggccagagcgcatcctacgatccgatgagcacggcaagcactccggtctcc
agcgcccgggctgcttccacgccggttagcgttcagcgtaccgccttggcggagccggcg
cctgccgcgccgcgtcagccgcaggcgccagctgcccgccaggtgcagcccgcactcgcg
acggctgagccgttgccgtcggctcccaagacggcttcgaacaaaggtggctggacgacc
aacaatgcgcccaccatcatggttcgcccgggcgatacggtggccgcattggctcgccgc
ttcggcgttccggaaaaggaaatcctcaaggcgaacggcttgaaatccgcgaaccaagta
gagccggggcagcgcctcatcgtgccgacctttggtggtgcgagcagtgcagcgaaggcc
gcagcatccggttccatcgccgacttcgaaggcggtaaaaggcagcctccgccgctaccg
gccggccagcgcgaagtggcaattctccccggccagtcgcaatcccgcgacaaaagcgaa
tcgcgcagcgatgtggccgcgggcaaactcaataacgccggtgccggtgacggctcggat
ggcgcctataccgtcaagccgggggactcgctgaacaagatcgcgaaggcgaacggcgta
tcggtggcggccctgaagcaggcaaacggcctgacggcagaaggcattcgcgtcggccag
aagctgaagatgcccggtgctgcagcgacggcaaccgacgcggtcgtcgcggcctccgtt
ccggcgaagggggagacgaaggtggcgtcgcttgatcagggcaagccggcggaatacaag
ccgccggtcgccaaggaaagcgtatcggacgttgccatcagatccgatgtcgaccaggag
tctccgaagtcgacgggcatcagcaaatatcgctggccggtccgtggcgcggtcgttgcc
ggctacggcgcaaatgtcgacggcaatcgcaatgacggcatcaacatctcggtgcctgaa
ggcacgccgatcaaggcggccgagaacggcgtggtcatctattccggcagcagcttgaag
gaactggggaatgctgtgctggtccgccacgatgacgggactgtcacggtctatggcaat
gcttcgcagctcaaggtgcagcgcggcgagaaggtgcagcgtggtcagacgcttgccgcc
tccggcatgaccggcaaggcaagccaaccgcaggtgcacttcgaggtacgcaagaatgcg
acgccggtgaacccggcgaccttcctcgagtag
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