Sinorhizobium fredii USDA 257: USDA257_c37510
Help
Entry
USDA257_c37510 CDS
T02188
Symbol
ybiO2
Name
(GenBank) putative MscS family protein YbiO
KO
K22044
moderate conductance mechanosensitive channel
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c37510 (ybiO2)
Transporters [BR:
sfd02000
]
Other transporters
Pores ion channels [TC:
1
]
USDA257_c37510 (ybiO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AFL52300
UniProt:
I3X8U4
LinkDB
All DBs
Position
3912780..3915620
Genome browser
AA seq
946 aa
AA seq
DB search
MQVRRVPPFATVPFGILMIMVAMWMLSGSTSESGADDMMAAILLRGLGLGFLFLSITLIA
FGNLNNRNLASGIGLFNTGRQLGGLIGVAALQTLIDHNVVANVAVLGANVTAGGPAVIER
LATTTAMLTAKGMDAAAAGRAATSLLGRVVTGQSTVIAFDTAFNAVALLFVIAAPILVAI
KIGLAKVRAARLLKTKESRENYAAFLENVRQELLWTAVRTGKYGERAKERSINPCLLLLI
FALLMPCQPALAQTDRNPVGQPTSVAALPPEDLRQLLDLLQRPDIQTWLQSQTGNRPVEE
QSSAEAANAREIIVGRLNAVRSFVHDMATAIPTLPAELHRARVALMTEMRGQGSFAAILP
LVFFATLGFGLEWLYWHATSGFRDRMIVTHLDTVDDRLRAAGLRILYGLGVLLAFAVGSV
GAFLLFDWPPLLQHSVLAYLLVFLAVRLTLVVGRIVLAPGAERFRLMPVATVTARFWFFW
SAVLVGLFAFGHFTYQLLPMLGVGHEATYIVALASGLILFGLALVALWRCPTFDGVDMVS
RRHRVSTVLGTLYIIANWLVALSGVAATFYIGVVLLVLPIAISCVRLSIDHIMRPPGTIA
ANEGVPSLAGAALERGLRSLLLIGGAYLIASLLGLDFGTLAARDTMATHLIRGLLNAFVV
ILLADFTWRMTSTWIDRKLMQTAVGDAVDPDELRRSARLRTLLPVLRNVLFVVLLAMAIL
MALSSLGVEIGPLIAGAGVVGLAVGFGAQTLVKDIISGMFFLLDDAFRVGEYIESGSIKG
TVESFSLRSIKIRHHRGALHTIPFGSLDKITNYSRDWAIDKIMVSVTYNTDLDVVKNTVK
QVGKQLLTDEEIAPSIMETLKMQGVEQFGDFAIQIRMKIMTKPGEQAVIRRRAYALIKKA
FDAKGIKFAVPTVSVAGGGDASSAVAQKGLDLIKPPPQTEQAALDA
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgcgccgcgttccgccgttcgccacggtgccgttcggcatcctgatgatcatg
gtcgcgatgtggatgctgtccggatcgaccagcgaaagcggcgcggacgacatgatggca
gcaatcctgctgcgcggcctcggccttggcttcctgtttctgtcgatcacgctgatcgct
ttcggcaacctcaacaaccgaaatctcgcctccggcatcggcctcttcaataccggccgt
cagctgggtgggcttatcggagtggccgcactccagacgctgatcgaccataatgtcgtc
gccaatgtcgcggtcctcggtgccaacgtcaccgcaggaggccccgcggtcatcgagcgg
ctggcgacgacgaccgcgatgctgacggccaaaggcatggacgccgcggccgctggccgg
gcagcgaccagccttctcggccgggtcgtgacaggtcagtccaccgtgattgccttcgac
acggcgttcaacgctgtcgcgctgctgtttgtcatagccgcgcccatcctcgtcgcaatc
aagatcggactagcgaaagtgcgcgctgcgcggttgctcaagaccaaggagtctcgtgag
aactatgcggcttttttggagaatgtacgccaagagttgctgtggaccgccgttcggacc
ggtaaatacggtgaacgggccaaggagcgttccatcaatccctgcttgttgctactcatc
ttcgctctactgatgccgtgccaaccagccttggcccaaaccgaccgcaatccggtcggg
cagccgacatccgttgccgcgctacctccggaagatttgcgacagcttctcgatctcttg
caacgccccgacattcaaacatggcttcagtctcaaacggggaaccgcccggtcgaagag
caaagttcggccgaagccgccaacgcccgcgagatcatcgttggccggctgaatgcagta
cgctccttcgttcacgacatggcgaccgccattccgacactgcccgccgaactccatcga
gcgcgtgtcgctttgatgaccgagatgaggggacagggatccttcgccgccattctgccg
ctggtcttttttgcgacgctggggttcggtttggagtggctctattggcacgccacatct
ggcttccgcgaccggatgatcgtgacacatctggataccgtcgacgatcgattgcgggct
gcgggattgcgtatcctctacggccttggcgtccttctggcctttgcagtcggaagtgtt
ggcgccttcctgctgttcgactggccaccgttactgcagcacagcgtcctcgcttatctt
ctcgtcttcctggccgtccgtttgacattggttgtagggcggatcgtgcttgctcccggc
gctgaacggtttcggctgatgcctgtggcgacagtcaccgctcgcttctggtttttctgg
tcggcagtactggttggcctcttcgcatttgggcacttcacctatcagctgttgccgatg
ctcggagtaggacatgaggccacatacatcgttgcgcttgcatcgggtttgatcctgttc
gggctggccctcgtcgcactttggcgctgtccaacattcgacggtgtcgatatggtgagc
cgccgacaccgcgtcagtaccgtccttgggacgctctatataatcgccaactggttggtc
gcgctgtccggcgttgccgccacgttttacattggggtggtgcttctggttttgccgatt
gcgatttcctgcgtgaggctctcaatagaccatattatgcgtccgccgggcacgatcgcc
gctaatgaaggtgtaccttcgctcgctggggcagcattggaacgcggtctccgctctctg
ctgctgatcggaggcgcttacctcattgcatcgctgcttggactcgacttcggcacactg
gcggccagggacaccatggcaacccatttgattcgagggctcctgaatgcctttgtcgtc
attctgctggccgattttacatggcggatgacgagtacatggatagatcgcaagctgatg
cagacagcggtgggcgacgcggtcgaccccgacgagttgcgacgaagtgctaggcttcgc
acattacttcccgtccttcgcaatgtattgtttgtcgtgctgctcgcaatggccatactg
atggcgctttccagtctgggcgtggagattggtccgcttatcgccggcgcaggtgtcgtc
gggcttgctgttggtttcggtgcccagacgctggtcaaagacattatctccggaatgttc
ttcctcctcgacgacgcctttcgggtcggcgaatacattgagagcggcagtatcaaaggc
accgtcgaatccttttcgttgcgctcgataaagatcaggcatcatcgtggtgcgctccat
acgatcccgttcggctcgctcgacaagatcaccaactattcgcgtgattgggcaatcgac
aagatcatggtgagcgtcacctacaataccgacttggacgtcgtaaaaaatactgtcaag
caggttggcaagcagctgctgacagatgaggaaatcgcgccgagcatcatggaaactttg
aagatgcagggcgtcgagcagtttggcgatttcgctattcagattcgcatgaagatcatg
acaaagccgggcgagcaggcggtgatccgtcgccgtgcctatgctttgatcaaaaaggcc
ttcgatgccaaagggatcaaatttgccgttccgactgtctccgtcgccggcggcggggac
gcaagcagcgcggtcgcgcagaaggggcttgatctcatcaaaccaccgccgcagaccgag
caagcggccttagatgcctag
DBGET
integrated database retrieval system
