Sinorhizobium fredii USDA 257: USDA257_c38730
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Entry
USDA257_c38730 CDS
T02188
Symbol
fixK1
Name
(GenBank) nitrogen fixation regulation protein FixK
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
USDA257_c38730 (fixK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c38730 (fixK1)
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
USDA257_c38730 (fixK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_20
HTH_11
Sigma70_r4
LacI
MarR_2
MarR
HTH_Tnp_ISL3
KYNU_C
Rv2175c_wHTH
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFL52418
UniProt:
I3X962
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Position
4033202..4033840
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AA seq
212 aa
AA seq
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MYAASNLTEQRFAQSHGLSGAQLPGPHLVSSYKAGRAVYAEGDAIDKCYQVATGAVRVYR
LLSDGRRQVVSFHLPGEMFGFEAGSNHRFFAEAITETRLAVFGRRSMHERSQELLDIALA
GMARAQEHLLVLGRQCAVERIAAFLADLSDRQGGVRQLRLPMSRQDIADYLGLTIETVSR
VMTKLKERSVIALRDARTVNIMRLDALRSLCH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgcttccaaccttacagagcaacgcttcgcacagtcccacggcctctcagga
gcccagcttcctggcccacatcttgtttcaagctacaaggctggtcgagccgtgtatgca
gaaggtgacgccatagacaagtgctaccaggttgccactggagccgtgcgtgtttaccgg
ctgctctccgacgggcggcgacaggtcgtatcctttcatctgccgggggaaatgttcggt
ttcgaggcgggctccaatcaccgcttttttgcagaggccattaccgagactagactggcc
gtctttgggcggcgctcgatgcatgagcgttcgcaggaacttctcgatattgcactggct
ggtatggcgcgggcgcaggagcatcttctggttctgggacggcagtgtgccgtggaacgc
atcgccgcattcttggcggacctgtctgaccgccagggaggcgtgcggcagttgcggctg
ccgatgtcgcggcaagacattgcggactatctcggcctgacgatcgagacggtttcgcgt
gtcatgacgaagctgaaggagcgcagtgtcatcgctctgcgagacgcaaggacggtaaac
atcatgaggctcgacgctctccgctcgctttgccactga
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