Sinorhizobium fredii USDA 257: USDA257_c39100
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Entry
USDA257_c39100 CDS
T02188
Name
(GenBank) ngoMIVM: modification methylase NgoMIV
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00270
Cysteine and methionine metabolism
sfd01100
Metabolic pathways
Module
sfd_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
USDA257_c39100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c39100
03032 DNA replication proteins [BR:
sfd03032
]
USDA257_c39100
03036 Chromosome and associated proteins [BR:
sfd03036
]
USDA257_c39100
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sfd02048
]
USDA257_c39100
Enzymes [BR:
sfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
USDA257_c39100
Transcription factors [BR:
sfd03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
USDA257_c39100
DNA replication proteins [BR:
sfd03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
USDA257_c39100
Chromosome and associated proteins [BR:
sfd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
USDA257_c39100
Prokaryotic defense system [BR:
sfd02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
USDA257_c39100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AFL52455
UniProt:
I3X999
LinkDB
All DBs
Position
complement(4069344..4071347)
Genome browser
AA seq
667 aa
AA seq
DB search
MDAKAEALARAKKAIVNLQRQMTERILKVAAEVDNLMEHLTPRETVHFLQAACGLSASDA
STYCKFSTRLDGVGETLRASRTQFPLVKALVSADAETRKEALWKMRAGARVEVRDVAAIK
IRLREEKLLPEQVLAQSRMRRVVAAAGRRASKAAAGLDGRMTAFIRLAEDCRSGMDRMEV
ESESLASERVKAEATTLLPLFEAAFGSSHRSVRDLVASSTSPEERRIGLVHHSLRKFAEG
RFGRHGGYALDSSRAGARQTNIIECLRAVTSAPRSWIVRPWIKQHGPLVELPDRRLSFVE
LCAGSGGMALGLEAAGFEPAALVEIDKNAAATLRLNRPGWNVIQQDVRTVDFKPFRSQRI
DLLVGGLPCQPYSEDGKGLGKDDPRDLLMQGARAVEEMRPWACMFENVAGLQHSKHADHL
GAFLSALKKAGYVVDLFRMNTEDYGVAQERERLLIVGMRGESMSGFRMPPSFPQWRTNLG
DAIGDLMAANGWEGAQEWSRARREQIVKKDGALLRGVLASTIVGRKGGSREKERLRWALK
GLSIDGVADEAPTRADADAAGEGFLPRLTLRMRARLQGFPDSWQFVGGKDSAARQIGNAV
PPVIAQAMGLAIHAALDEVVFDYARMLLRPHQAERVEAPRTAMEAPLLSPVGLVGEDRHP
TVTFAEA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaaggcggaagcgcttgcaagggcgaagaaggcaatcgtgaaccttcagcga
cagatgacggagcgcatcctgaaggtcgctgccgaagtcgataatcttatggagcacctt
acgcctcgcgagaccgtgcacttccttcaggccgcctgcggcctaagcgcttccgacgct
tccacctactgcaagttctcgacaaggctggatggagtcggcgaaaccctccgcgcctcc
cggacccagttccccctcgtcaaagcgctcgtgtccgccgacgcggaaacgcggaaggaa
gctctctggaagatgcgcgccggcgcccgcgtcgaagtgcgcgacgtcgccgccatcaaa
ataaggcttcgcgaggagaagctgttgccggaacaggtgctggcgcagtcgcgcatgcgg
agagtggtggccgccgccggaaggcgggcttccaaggccgcggcggggctcgacggccga
atgaccgccttcatccgccttgccgaggactgccgcagcggaatggaccgtatggaagtg
gagagcgaatccctcgcatccgagcgagtcaaggcggaagccaccaccctcctccccctg
tttgaagcggcgttcggcagcagccatcgctccgtgcgggaccttgtcgcgtcttcgacg
agccccgaggaacggcggatcggcctcgtacaccactcgttgcggaagttcgccgaggga
aggttcggacgtcatggcggatatgcgctcgacagctcgcgcgccggagcaaggcagacg
aacatcatcgagtgcctgcgcgcggtgacgagcgcgcctcggtcatggatcgtccgcccc
tggatcaagcagcacggccctcttgtggagcttccggaccgccgcctctcgttcgtcgaa
ttgtgcgctggatctggtgggatggcgctcggcctggaagccgcgggcttcgagccggcg
gcactggtggagatcgacaagaacgcggcagcgacgctgcgcctcaaccggccgggctgg
aacgtcatccagcaagacgtcaggaccgtcgacttcaagccgttccgcagccagcgcatc
gacctgcttgtaggaggactgccctgccagccgtattccgaggacggcaagggcctcggc
aaggatgatccccgcgatctcctgatgcagggcgcaagagctgtcgaggagatgcgtcca
tgggcatgcatgttcgagaacgtggcgggcctgcagcattcaaagcacgccgaccatctc
ggagccttcctcagcgcactgaagaaggccggctatgtggtcgacctgttccgcatgaat
acggaggactacggggtggcccaggaacgggagcgcctcttgatcgtcggcatgcgaggc
gaatccatgagcggcttccgcatgcctccaagcttcccccaatggcgcacgaacctgggt
gacgctatcggcgacctgatggccgcgaacggctgggagggcgcccaggaatggagccgg
gcgcgcagggagcagatcgtcaagaaggacggggctctgctgcgcggcgtgctggcatcg
acgatcgttggccgcaagggaggctcgcgcgagaaggagcgcctccgctgggcgctgaag
ggcctgagcatcgacggcgtcgcagacgaggcgccgacgcgggccgatgcggatgcggcc
ggcgaaggctttctgcctaggctgacgctaaggatgcgagccaggcttcaaggattcccc
gactcctggcaattcgtcggaggaaaggattcggcggcgaggcagatcggaaatgcagtt
ccacccgtaatcgcccaagcgatgggcctggcgattcatgcggcactcgacgaggtcgtg
tttgactacgccagaatgttgctgcggccgcaccaagcggaacgggtggaggcgccaagg
accgcgatggaggcgccgttgctaagtcccgtcggcctcgtcggagaagatcgccaccct
acggtcactttcgctgaagcctga
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