KEGG   Sinorhizobium fredii USDA 257: USDA257_c39870
Entry
USDA257_c39870    CDS       T02188                                 
Symbol
nrdJ
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase NrdJ
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd00230  Purine metabolism
sfd00240  Pyrimidine metabolism
sfd01100  Metabolic pathways
sfd01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    USDA257_c39870 (nrdJ)
   00240 Pyrimidine metabolism
    USDA257_c39870 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfd03400]
    USDA257_c39870 (nrdJ)
Enzymes [BR:sfd01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     USDA257_c39870 (nrdJ)
DNA repair and recombination proteins [BR:sfd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    USDA257_c39870 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AFL52531
UniProt: I3X9H5
LinkDB
Position
complement(4156630..4160421)
AA seq 1263 aa
MQIERRFTKAGQSAYAEIEFRKATSEIKNPDGSIVFRLANIDVPAQFSQVAADILAQKYF
RKAGVPAKLKRVEENDVPSFLWRSVPDTEALKALPKDEQYGSETDARQVFDRLAGTWAYW
GWKGGYFDTEEDASAFRDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
NGKLRKSKSAYEHPQPHACFIQSVADDLVNEGGIMDLWVREARLFKYGSGTGSNFSHLRA
GGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEEYINWKVKE
EQKVAALVTGSKIVAKHLKAIMKACINCDGSDDACFDPKQNPALKREIRAAKQALVPENY
VKRVIQFARQGYKDIEFKTYDTDWDSEAYLTVSGQNSNNSVSIKDDFLRAVEADGEWHLT
ARKDGRVMKTLKARDLWESISYAAWASADPGLHFNTTMNDWHTCPAAGPIRASNPCSEYM
FLDDTACNLASLNLMQFKDAANKRINIADYEHAVRLWTIVLEVSVMMAQFPSREIAELSY
EYRTLGLGYANIGGLLMSTGIPYDSAEGRAIAGALTAIMTGVAYATSAEMSAKLGPFPGF
APNRDNMLRVMRNHRRAAHGETTGYEGLSVDPVALIHADCSDQDLIAHAKSAWDKAVELG
EKHGYRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALR
TLGYSESQIAEIEAYAVGHGNLNQAPAVNPSTLKAKGFTDDKVDALNTALKSAFDIKFVF
NQWTLGADFLKDTLKVTDEQLASMDFNLLEHLGFSKKDIEVANIHVCGAMTLEGAPFLKA
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
LSWKLALKANALYRDGSKLSQPLNASLIEDEEDEDALEELLQAPAAAQAVAVTEKIVERV
IEKVVRAREKLPNRRQGYTQKAIVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGRGIQEGKTNLVSTGWTRGYKPTIVGGTGDRSEPKGASTGAPA
RAAGGATVTSIAGNAARKLEPTTAIASSEVVAFKRDYEERAAELAEEIAEEVEQEVTALF
SDKAAAEAAAAKSEAKKVEAERRARSIMQGYTGNMCSECQNFTMVRNGTCEKCDTCGATS
GCS
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgcagatcgaacgtcggttcacgaaggcagggcaatcggcctatgccgagatagaattc
cgcaaggcgacgagcgagatcaagaatccggacgggtcgatcgtcttccgcctcgccaat
atcgacgtgccggcgcagttctcccaggtcgcggccgacattctcgcgcagaaatatttc
cgcaaggcgggcgtgccggccaagctgaagcgcgtcgaggaaaacgacgtcccctccttc
ctgtggcgctcggttcccgacacggaggcgctgaaggcgctaccgaaggacgagcaatac
ggatccgaaacggatgcccgccaggttttcgatcgcctcgccggcacctgggcctattgg
ggctggaagggtggctatttcgacacggaagaggacgctagcgccttccgtgacgagctt
gcctatatgctcgccacccagcgcgtcgcgccgaattcgccgcaatggttcaacaccggc
ctgcactgggcctatggcatcgacggccccggccaaggtcatttctatgtcgatcccttc
aacggcaagctgaggaaatcgaagtccgcctacgaacacccgcagccgcatgcctgcttc
atccagtcggtcgccgacgacctcgtcaacgagggcggcatcatggacctctgggtgcgt
gaggcgcgtctcttcaaatacggctcgggcaccggctccaacttctcgcatctgcgcgcc
gggggtgaaaagctctcgggcggcggaaagtcctccggcctgatgagcttcctgaagatc
ggcgaccgcgctgccggcgccatcaagtcgggcggcacgacgcgccgcgccgccaagatg
gtggtcgtcgatatcgaccatccggatatcgaggaatacatcaactggaaggtcaaggaa
gagcagaaggtcgccgcactcgtcaccggctcgaagatcgtcgccaagcacctgaaggcg
atcatgaaggcgtgcatcaactgcgacggcagcgatgatgcctgcttcgacccgaaacag
aacccggcgctgaagcgcgagatccgcgctgccaaacaggctctggtaccggaaaactat
gtcaagcgcgtcatccagttcgcccggcagggctataaggacatcgaattcaagacctac
gacacggactgggattcggaagcctatcttacggtttcaggccagaactccaacaattcc
gtctcgatcaaggacgacttcctgcgcgccgtcgaggccgacggcgaatggcacctgacg
gcccgcaaggacggccgggtgatgaagacgctgaaggctcgtgatctctgggagtcgatt
tcctatgcggcctgggcgtcggccgatccggggctgcacttcaacacgacgatgaacgac
tggcacacctgcccggcggcggggccgatccgcgcgtcgaacccgtgctcggaatacatg
ttcctcgacgacacggcctgcaacctcgcatcgctcaacctgatgcagttcaaggatgcc
gccaacaagcggatcaacatcgccgactacgaacacgccgtgcgtctctggacgatcgtg
cttgaagtctcggtaatgatggcgcagttcccgtcacgtgagattgccgaactctcctat
gaataccgcacgctcggcctcggctatgccaatatcggcgggctgctgatgtccaccggc
attccctatgattcggccgaaggccgcgccatcgccggcgcgctgaccgccatcatgacc
ggcgttgcctatgcgacctcggcggaaatgtcggccaagctcggccccttccccggcttc
gcgccgaaccgcgacaacatgctgcgcgtcatgcgcaaccaccgccgcgccgcccatggc
gaaaccacgggctatgagggcctgtcggtcgacccggtcgccctcatccacgccgattgc
tcggaccaggatctgatcgcgcacgccaagagcgcctgggacaaggccgtcgagctcggc
gagaagcatggctaccgcaacgcccaggcgacggtgatcgcgccgaccggcacgatcggc
ctcgtcatggattgcgacaccaccggcatcgagcccgatttcgcgctggtcaagttcaag
aagctcgccggcggcggctacttcaagatcatcaaccgcgccgtgccggaggcgttgcgc
accctcggctattcggaaagccagatcgccgagatcgaggcctatgcggtcggccatggc
aatctcaaccaggcgccggccgtcaatccttcgacgctgaaagccaagggcttcaccgac
gacaaggtcgacgccctcaacacggcgctgaaatccgccttcgacatcaagttcgtcttc
aaccagtggacactcggcgccgacttcctcaaggacacgctgaaggtcacggacgagcag
ctcgcctcaatggacttcaatctcctcgagcacctgggcttctcgaagaaggacatcgaa
gtcgcgaacatccatgtctgcggtgccatgacgctcgaaggcgcgccgttcctcaaggcc
gagcacctgccggtcttcgattgcgccaatccctgcggcaagatcggtaagcgctacctt
tcggtcgaaagccacatccgcatgatggccgccgcccagccgttcatctcgggtgccatt
tccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctacatg
ctctcctggaagctggcgctgaaggcgaatgcgctctaccgcgatggttcgaagctgtcg
cagccgctgaacgcctcgctgatcgaggacgaggaagacgaggacgcgcttgaagaactg
ctgcaggcgccggccgctgcgcaagcggtcgccgtcaccgaaaagatcgtcgagcgcgtc
atcgagaaggtcgtgcgcgcccgggagaagctgccgaaccgccgtcagggctatacccag
aaggcgatcgtcggtggtcacaaggtctacttgcggaccggtgaattcggcgacggccgc
atcggcgagatcttcatcgacatgcacaaggaaggggccgccttccgcgcgatgatgaac
aacttcgccatcgccatctcgctcggcctgcaatatggcgtgccgctcgaggaatatgtg
gaggccttcaccttcaccaagttcgaaccggccggcatggttcagggcaatgacgcgatc
aagaacgcgacgtcgatcctcgactacgtgttccgcgaactcgccgtctcctatctcggc
cgtcacgaccttgcccatgtcgacacctccgacttcagcaacacggcgctcggccgcggc
attcaggaaggcaagaccaacctcgtctcgaccggctggacgcgcggctacaagccgacg
atcgtcggcggcacgggcgatcgctcggagccgaagggtgcctcgaccggcgctccggcc
cgcgccgccggcggcgccacggtgacctcgattgccggcaatgccgcccgcaagctggag
cccacaacggccattgccagctcggaggtcgtcgccttcaagcgcgactatgaggagcgc
gccgccgagctcgccgaggagatcgccgaagaagtcgagcaggaagtgaccgccctcttc
tccgacaaggcagccgcggaggccgccgctgccaagtcggaagccaagaaggtcgaagcg
gaacgccgcgcccgctcaatcatgcagggctacaccggcaacatgtgctccgagtgccag
aacttcacgatggtcaggaacggcacctgcgagaagtgcgacacgtgcggcgccacgagt
ggctgcagctga

DBGET integrated database retrieval system