Sinorhizobium fredii USDA 257: USDA257_c40310
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Entry
USDA257_c40310 CDS
T02188
Name
(GenBank) transcriptional regulator, AraC family
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfd03000
]
USDA257_c40310
Transcription factors [BR:
sfd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
USDA257_c40310
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
DUF3046
ROS_MUCR
Motif
Other DBs
NCBI-ProteinID:
AFL52575
UniProt:
I3X9L9
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Position
complement(4205628..4206632)
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AA seq
334 aa
AA seq
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MYVKIMPNLTGPLVVALLYDGLCTFEFGIVAEIFGLSRPEMGSEWYRFASCAVDEGPMRA
HGGLLIVADHGPEVIEQADIVVVPGWKGADVPVPKTLCQQLRAAHMRGARLASICSGAFV
LAATGLLSGGTATTHWRYADKLREHYPDIEVDDASLYRAHDRIHTSAGSAAGIDLLIEIV
RQDFGAVAANSVARRLVMPAHRTGGQAQFLERPVPIREGLEIAPLLDRIRADLTNNWSVE
RMAHETRMSTRTFLRRFSEATGQTPGDWVAAERVNEAKRLLCQGNARMEAVAMTVGFGSS
HTLRHHFRKKVGISPSEYRARFMIEAPDKQIASA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtaaagattatgccaaacctcaccggaccactcgttgtcgcccttctttacgat
ggcctttgcaccttcgaattcggcatcgtcgccgaaatcttcgggctctctcgaccagaa
atgggatcagaatggtatcgctttgcgagttgcgcggtcgatgaaggaccgatgcgcgcc
catggcggtttgctgatcgtggcggaccatggaccagaggtcatcgagcaagccgacatc
gttgtcgttccgggttggaagggcgccgacgttcccgttccaaagacactatgccagcag
cttcgtgccgctcacatgcgcggagcccggctcgcgtcaatatgttccggcgcatttgtt
ctggccgcgacaggtctgctttcgggtgggacagcaacgacgcactggcgctacgctgac
aagctccgcgaacattatcccgatatcgaggtcgatgacgcgtcgctctatcgtgcgcat
gatcgcatccacacgtcagcgggtagcgcggccgggatcgacctcctgatcgagatcgtc
aggcaggatttcggggcggttgcagcgaactccgtcgctagacgtctcgtgatgcccgcg
caccgaacaggggggcaggcgcagtttcttgagcgtcctgttccgatccgggaagggctg
gaaatcgccccgcttctggacagaatacgtgccgatctcacgaacaactggagcgtcgag
cgaatggcacatgaaacccggatgagcacgcgaacatttctacgccggttttctgaagcc
acgggacagaccccaggggattgggtcgccgccgaacgcgtcaacgaagcgaagcgtttg
ctgtgccaaggcaacgcaagaatggaggcggtagcgatgacagtgggtttcggaagctct
catacgcttcggcatcactttcgaaagaaagtcggtattagcccaagtgaatatcgcgca
cgttttatgatcgaagcgcccgataaacagatcgcatcggcttaa
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