Sinorhizobium fredii USDA 257: USDA257_c40430
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Entry
USDA257_c40430 CDS
T02188
Symbol
rlpA
Name
(GenBank) RlpA-like lipoprotein RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfd01011
]
USDA257_c40430 (rlpA)
Enzymes [BR:
sfd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
USDA257_c40430 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
USDA257_c40430 (rlpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
AFL52587
UniProt:
I3X9N1
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All DBs
Position
complement(4217308..4218402)
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AA seq
364 aa
AA seq
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MSAGARADCFECGFANDLVGQMTSDRKAAYLAGGIRLAAVPLLCAALAACGSASSVKTTK
SRSTEYFAESVYGVKASPRVATGRNIPKGGGRYQVGKAYQVKGRWYQPKEDFGYNKTGVA
SWYGSAFHGRMTANGEVYDKYHLSAAHPTFPLPSYARVTNMENGTSVIVRVNDRGPYEYG
RIIDVSSKTADMLDIKRKGSAKVRVQYVGRAPLEGNDMPYLMASYVTKGDRSPGVRPEGQ
IATGVMVASNEPLRNQVQDLGTVTVPAKSRLDTGVPVNALAAPAQGFPTPRSMTEFVLLP
EIGPIPTERPELIPLPDGTLAYAAAYVEVRVSDKASPFEAIMVDPNPLTPESILAYAKRQ
QGAI
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgggggctcgtgcggattgtttcgagtgcggctttgcgaatgatcttgtggga
cagatgacttccgatagaaaagcggcataccttgcggggggaatacggctcgcagccgtt
ccattactgtgcgcggcacttgccgcttgcggatcggcatccagtgtcaagacgactaag
tcgcgaagcacggagtacttcgccgaatccgtctatggggtcaaagccagcccccgggtc
gccaccggccgcaacatccccaagggcggcggccgctatcaggtgggcaaagcctatcag
gtcaagggcagatggtatcagccgaaagaggatttcggctataacaagaccggtgtcgcg
tcctggtacgggtcggcctttcacggtcgcatgaccgctaacggcgaagtctacgacaag
tatcacctctcggccgcgcacccgactttcccgctgccgagctatgcccgcgtcaccaat
atggagaacggcacttcggttatcgtgcgtgtcaatgatcgcggtccctatgaatacggc
cggatcatcgatgtatcgtcgaagacggcggacatgctcgacatcaagcgcaagggaagt
gccaaggtccgcgttcaatatgtcggccgggcacctctcgagggcaacgacatgccttat
cttatggcgtcctatgtcaccaaaggcgatcgcagcccgggtgtgaggccggaaggacag
atcgcgacgggtgtcatggtcgcatcgaacgagccgttgcgcaatcaggtgcaagacctc
ggcaccgtcactgtcccagccaaatcgcggctcgacacgggagtcccggtgaatgccctt
gccgcgccggcgcaaggctttccgacgccgcgttcgatgaccgagttcgtgctgctgccg
gagatcgggccgatcccgaccgagagaccggaattgatcccgctgccggacggcaccttg
gcctatgctgcggcctatgtcgaagtgcgggtcagcgacaaggcctcgccgttcgaagcg
atcatggtcgaccccaatccgctgacgcccgagtcgatccttgcctatgcaaagcggcag
caaggcgccatttga
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