Sinorhizobium fredii USDA 257: USDA257_c40760
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Entry
USDA257_c40760 CDS
T02188
Name
(GenBank) blue-light-activated protein
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
USDA257_c40760
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfd01001
]
USDA257_c40760
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sfd02022
]
USDA257_c40760
Enzymes [BR:
sfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
USDA257_c40760
Protein kinases [BR:
sfd01001
]
Histidine kinases
Cell cycle family [OT]
USDA257_c40760
Two-component system [BR:
sfd02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
USDA257_c40760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS_4
PAS_8
PAS
HisKA
PAS_9
HPTransfase
DUF3240
Motif
Other DBs
NCBI-ProteinID:
AFL52619
UniProt:
I3X9R3
LinkDB
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Position
complement(4251399..4254014)
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AA seq
871 aa
AA seq
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MTKLRQSGDYQMPVVDRGVRPGTVFRIIVLAIVLTASAAAFVVFKNQLENEIVLGILGVL
AMVGIFFLVSSVIGFIEVMPQSRPDELARAFVDAHEDGTVVTDRKGRIVYANAAYGALTG
AKGAAGIQSLETILSRNREATEAIYRLTNGLHEGKQGHEEFRLLKPLANGAMTGSGAHWF
RLKARVLPLEDADSNPLYLWQIADITAERDDQERFFKELQNAIDYLDHAPAGFFSAGRKG
EIFYINATLADWLGIDLTKFQPGSISIADLVAGEGLALIQSVQAEPGLKKTKVLDLDLRK
GNGQSLPVRLVHRVSSTRDGAPGESRTIVMSREGDEGDQSASNAAMRFTRFFNNTPMAIA
SVDGDGRILRTNAPFLKLFAGLVSQDDVERGLLIDAVMHEAVRGQLEEALAAAKDRQGDI
APIDSLHPADEGRHFRFYVNAVIDQSDQAPEEAAIVYALEITEQKALENQMAQTQKMNAV
GTLAGGIAHDFNNVLTAILLSADHLLLSARPADATFADLMEIKRNANRAAVLVRQLLAFS
RKQTMRPTVLNLTDVIGDLRMLVDRMTGTNVKVEVDYGRDLWPVRTDLGQFEQVLLNLAV
NARDAMPEGGIITLRTRNLPAGEVAALARRELPEDDFVMVEVSDQGTGIPAEILDKIFEP
FFTTKEVGKGTGLGLSMVYGIVKQSGGYIYPESEVGKGTTFRILLPRYVEVVETGEASAS
GGAPVKEARAPASDAATLAAQSEPTDLTGDSAVVLLVEDEEAVRRGGKRMLETRGYTVHE
AGSGVEALEIMEELDGAVDIVVSDVVMPEMDGPTLLRELRKKYPDLKFIFVSGYAEDAFA
RNLPADAKFGFLPKPFSLKQLAVAVREMLDS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaattacggcagtcaggtgactaccagatgccggtcgttgaccggggcgtgcgg
ccgggtaccgtgttcaggatcatcgtgctggcaatcgtcttgaccgcgtccgctgccgcc
ttcgtcgttttcaagaatcagctcgagaacgagatcgtcctcggtattctcggcgtgctg
gcgatggtcgggatattcttcctggtttcgtcggtgatcggttttatcgaggtcatgccg
caatcccgaccggatgaactggcccgcgcctttgtcgatgcccatgaggacggcaccgtg
gtgaccgaccgcaagggacgcatcgtctacgcgaacgcggcctacggcgccctgactggc
gctaaaggtgccgccggaatccaatcgctggaaaccatcctgtcgcgcaaccgggaggcg
accgaggcgatctaccggctgaccaacggactgcacgagggcaagcaggggcacgaggaa
ttccgcctgctgaagcctctggcaaatggcgcgatgacgggttcaggagcgcattggttt
cgactgaaggcgcgggtgctgccgctggaggacgccgacagcaacccgctttatctgtgg
cagattgccgatataacggcagagcgcgacgatcaggaacgctttttcaaggagttgcag
aacgccatcgactatctcgaccacgcgccggcaggctttttctccgccgggcgcaagggc
gagatcttctatatcaacgctacgcttgccgattggctggggatcgacctcacaaaattt
cagccgggatcgatcagcatcgccgatctcgtcgccggcgagggacttgcgctcattcag
tccgtccaggccgagcccggcctcaagaagaccaaggttctggatctcgacctgcgcaag
gggaacggccagagcctgccggtaagactggtccaccgtgtttcctcgacccgcgacggc
gcgcccggggaaagcaggacgattgtcatgtcccgcgagggcgacgagggcgatcagtcg
gcctcgaatgcggcgatgcggttcacacgcttcttcaacaacacgccgatggccatcgcc
tcggtggacggtgacgggcggattctcagaaccaacgccccgttcctgaagctttttgcc
ggccttgtttcgcaggacgacgtcgagcgcggcctgctgatcgacgcggttatgcacgaa
gccgtgcggggccagctcgaagaggcgctcgccgcggcgaaggaccggcaaggcgacata
gcgccgatcgactcgctgcacccggcggatgaaggacgccacttccgcttctacgtgaat
gccgtcatcgaccagagcgaccaggcaccggaagaagcggcgatcgtgtatgcgctggag
atcaccgagcagaaggcgctcgagaaccagatggcgcagacgcagaagatgaatgccgta
ggaacgctcgccggcggcatcgcgcacgacttcaacaatgtgctgacggcgatattgctt
tctgccgaccatctgctgctctcggcgcggccggcggatgcgacgttcgccgacctgatg
gaaatcaagcgcaatgccaaccgcgccgccgtcctggtgcggcaattgctcgccttctcc
cgcaagcagacgatgcggccgaccgtcctcaatctcaccgatgtgatcggcgatctcagg
atgctcgtcgatcggatgaccggcaccaacgtcaaggtggaggtggactatggtcgcgac
ctctggccggtaaggaccgatctcggccagttcgaacaggtgctgctcaacctggctgtg
aatgcccgcgacgccatgcccgagggcggaatcatcacgctccggacgcgaaacctgccg
gcgggcgaagtcgccgcgctcgcacgtcgagaactgccggaagacgacttcgtcatggtc
gaagtctccgaccagggcacgggtattccggcggagatcttggacaagatcttcgagcct
ttcttcacgacgaaggaggtgggcaagggcacgggcctcgggctttcgatggtttatggc
atcgtcaagcagtccggcggctatatctatccggagtcggaggtcggcaagggcacgacc
ttccgtattctgttgccgcgctatgtggaagtggtcgagaccggcgaagcgtccgcatcc
ggcggcgcgccggtcaaggaagcgcgggcgccggcaagcgatgcagcgacactggccgct
cagtcggagcctacggatctcaccggcgattccgccgtggtgctccttgtcgaggacgag
gaagcggtgcgtcgcggcggcaagcggatgctcgagacacgcggctacacggtccatgag
gcgggatcgggcgtcgaagcgctcgagattatggaggagctcgacggcgcggtcgatatc
gtcgtgtcggatgtggtgatgccggagatggacgggccgacgctcttgcgcgaattgcgg
aagaaatacccggatctgaagttcatcttcgtgtcgggctatgcggaggatgcctttgcc
cgcaacctgccggccgatgccaagttcggcttcctgccgaagcccttctctctgaagcaa
ttggcggtggccgtccgtgaaatgctggattcctaa
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