Sinorhizobium fredii USDA 257: USDA257_c45020
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Entry
USDA257_c45020 CDS
T02188
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00470
D-Amino acid metabolism
sfd00550
Peptidoglycan biosynthesis
sfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
USDA257_c45020 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
USDA257_c45020 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfd01011
]
USDA257_c45020 (murD)
Enzymes [BR:
sfd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
USDA257_c45020 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfd01011
]
Precursor biosynthesis
Amino acid ligase
USDA257_c45020 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
TrkA_N
KARI_N
Motif
Other DBs
NCBI-ProteinID:
AFL53040
UniProt:
I3XAY4
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All DBs
Position
complement(4674554..4675945)
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AA seq
463 aa
AA seq
DB search
MIPVTTFKGRRVALFGLGGSGLATAEALVAGGAKVTAWDDNPDSVAKAAAAGIATADLRH
VEWNAFAAFVLSPGVPLTHPKPHWTVDLAHQAGVEIIGDIELFVRERRAHAPECPFIAIT
GTNGKSTTTALIAHILKTSGRDTQLGGNIGRAVLTLDPPMAGRFYVVECSSYQIDLAPTL
DPTAGILLNLTPDHLDRHGTMQHYADIKERLVAGSGTAVVGVDDSFSSLVADRVQRAGTR
VVRISRRHVLADGIYAEGSSLMRAEGGSSARFADLSGIQTLRGGHNAQNAAAAVAACLAV
GVDEQDIVNGLESFPGLKHRMQPIAKRGEIVFVNDSKATNADAAAPALSSYERIYWIAGG
LPKEGGIASLTPFFPAIVKAYLIGEAAPAFAATLGEAVPYEISGTLEKAVAHAAADAARD
RQGPGAVMLSPACASFDQYKNFEMRGDAFVGHVAALEGVTMLI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtcaccacattcaagggcaggagggtcgcgctcttcggcctcggcggttct
gggctggcgacggccgaggcgctggtagcgggcggcgcaaaggtcaccgcctgggacgac
aaccccgacagcgtcgccaaggcggccgcggcaggcatcgcaacggcggatttgcgccat
gtcgagtggaacgctttcgccgctttcgtgctttcgccgggcgtgccgctgacgcatccg
aagccgcactggaccgtcgatctcgcccaccaagccggtgtcgagatcatcggcgacatc
gagctgttcgtgcgcgagcggcgcgcccatgcgcccgaatgccctttcatcgccatcacc
ggcaccaacggcaaatcgacgacgacggcgctgatcgcccatatcctgaagaccagcgga
cgggacacccagcttggcggcaatattggtagggccgtgctgacgctcgatccgccgatg
gcggggcgcttctacgtggtcgagtgctcatcctatcagatcgaccttgcgccgacgctt
gaccccacggcgggaattcttctcaacctgacccccgaccatttggaccggcacggtacc
atgcagcactatgccgacatcaaggaacgattggtggcgggaagcggcacggccgtggtc
ggcgtcgacgacagtttctcgagcctggtcgccgaccgcgtgcagcgggccggaacccgg
gtcgtgcgcatctcgcgccgtcatgtactggccgatgggatctatgccgaagggtcgtca
ctcatgcgggccgagggcggctcgtcggcgcgcttcgccgacctttccggcatccagacg
ctgcggggcggacacaacgcccagaatgcggcggcggccgttgccgcctgccttgccgtc
ggtgtcgacgagcaggacatcgtcaacgggcttgagagctttcccggcctcaagcaccgg
atgcagccgatcgcgaagagaggcgaaatcgtcttcgtcaatgacagcaaggcgacaaat
gccgatgcggcggccccggcactttcgagttacgagcggatctattggatcgctggcgga
ctgccgaaggaaggcgggattgcctcgctgacgccgttcttcccggcgatcgtcaaggcc
tacctgatcggtgaggcggcgcccgcattcgcggcgacgctcggcgaagcggtaccctac
gagatttccggcaccttggaaaaggcggtcgcacacgcggcggcagatgcggcgcgcgat
cgccagggtcctggcgccgtgatgctttccccggcttgcgcaagcttcgaccagtataag
aatttcgagatgcggggcgatgcctttgtcggccatgtggcggcgctcgaaggcgtgacc
atgctcatctga
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