Sinorhizobium fredii USDA 257: USDA257_c45040
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Entry
USDA257_c45040 CDS
T02188
Symbol
murF
Name
(GenBank) putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00300
Lysine biosynthesis
sfd00550
Peptidoglycan biosynthesis
sfd01100
Metabolic pathways
sfd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
USDA257_c45040 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
USDA257_c45040 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
USDA257_c45040 (murF)
Enzymes [BR:
sfd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
USDA257_c45040 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AFL53042
UniProt:
I3XAY6
LinkDB
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Position
complement(4677190..4678638)
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AA seq
482 aa
AA seq
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MSWLWTCSDLLAAMNGRPVGSLPDGIIGISIDSRTIAKGEAFFAIRGDRVDGHDYAGLAL
ANGASLLVVSEGKLPALGRLIAPMIVVDDVLEAMIRLGCAARDRSAAKVIAVTGSVGKTT
TKEMLRHVLSPLGRVHASVASFNNHWGVPLTLARMPETTDFGIFEIGMNHHGEIRPLTAM
VRPHVAVVTSIAAAHLGNFASLDEIASAKAEIFEGVVKGGHAVINRDSPQFDLLERAAAA
AGVGHIHAFGANPKSEYRLIEFAAGADRSVLWAGIGGRTLEVTIGAPGRHIAENALAVIA
AAQLAGADLDRVVASLATMQPEKGRGLRHRLKIGAGHLTLIDESYNANPASMRAAISLLR
DADPAAGGRRIAILGDMLEMGEHAAAVHAALAEPIVEAGIADVWLAGPDMAHLRDALPAE
VTVVHREAVGDLTSYALGAVAAGDVVMVKSSKGTGCAKIVQALLDAYPEEKAEARGKYRG
EV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgagctggctctggacatgcagcgatctgcttgcggccatgaatggccgcccggtcgga
agcctgccggatgggattatcggcatctcgatcgacagccgcacgatcgccaagggcgag
gcctttttcgcgatcaggggcgatcgggtcgatggacacgactatgccggcctcgcgctt
gccaacggcgcctcgctgctcgttgtcagtgaaggcaagcttccggcgctcgggcggttg
atcgcgccgatgatcgtcgtcgatgacgtcctggaggcgatgatccgcctcggctgcgcc
gcgcgcgaccgcagtgccgcgaaggtcatcgccgtcaccggctcggtcggcaagacgacg
acgaaggagatgctgcggcacgttctgtcgccgctcgggcgcgtccatgcctccgtcgca
tcgttcaacaatcattggggtgtgccgctgacgcttgcgcggatgccggagacgaccgat
ttcggcatcttcgagatcggcatgaaccatcatggcgagatccggccgttgaccgcgatg
gtacgtccgcatgtggccgtcgtcaccagcattgccgctgcccatctcggcaacttcgcc
agtcttgacgagatcgcctcggcgaaggcggagatcttcgagggcgtcgtcaagggcggc
catgcggtgatcaaccgcgacagtccgcagttcgatctcctcgaaagggcagccgcggcg
gcaggcgttggtcacatccacgccttcggcgccaacccaaaatcggaatatcggctgatc
gagttcgccgcgggcgcggatcgatccgtcctctgggccggcatcggcggccgaacactg
gaagtcacgatcggcgctccgggaaggcatattgccgagaatgccctggcggtgattgcc
gccgcgcaactcgccggcgctgacctcgatcgcgtcgttgcctcgctcgcgaccatgcag
cctgaaaagggccggggattgcggcaccgcctgaagattggcgcgggtcacctgacgctg
atcgacgaaagctacaatgccaacccggcgtcgatgcgggcggcgatctccctcctgcgc
gatgccgatccggcggccggcggccgccgtatcgcgattctcggcgacatgctggagatg
ggcgagcacgccgcggctgtacatgccgctttggcggagccgatcgtagaggcgggcatt
gccgacgtctggctcgccgggcccgacatggcgcatctgcgtgacgctttgccggccgag
gttacggtcgttcaccgcgaggcggtcggagatctcacctcttacgcactcggcgcggtt
gctgccggcgacgtggtgatggtcaaatcatcgaagggcaccggctgcgccaagatcgtt
caggctcttctcgatgcctatcccgaagagaaggccgaagcgcgggggaagtatagaggc
gaagtatag
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