Sinorhizobium fredii USDA 257: USDA257_c45260
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Entry
USDA257_c45260 CDS
T02188
Name
(GenBank) putative ribonuclease
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c45260
Enzymes [BR:
sfd01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
USDA257_c45260
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
USDA257_c45260
Prokaryotic type
USDA257_c45260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Phage_coat
Motif
Other DBs
NCBI-ProteinID:
AFL53064
UniProt:
I3XB08
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All DBs
Position
complement(4703121..4703894)
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AA seq
257 aa
AA seq
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MAVRAMIQVVRVATLALGLGLSSLAAAEEAPGEEAKTAPAIGTTQYVLAVSWQPGFCETR
PTRKEGVDQTSERFDATHFSLHGLWPLKKSYCGVEAELKAQDRKGDWLDLPKLAMADETA
ARLLVAMPGVKSGLDRHQWLRSGTCQTENAEAYFSLQLRLLDQLNGSAVRALFADKIGSE
IGELQIKAAFDQSFGAGAGDRVRMRCQTVDGRSVITGLTIGLSGDLSDRADLGSLMKAAG
PTEFKCAKGIADAAGRG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcgggctatgatacaggtggtgagagttgcaacgcttgctctgggtttgggg
ctgtcgtccctcgccgcagcggaggaggcgccgggtgaagaggcgaagacggcgccggca
atcgggacgacgcaatatgtgctggcggtcagctggcagccgggcttttgcgagacgcgg
ccgacgcgcaaggaaggcgtcgaccagacgtccgagcggttcgatgccacgcatttttcg
cttcacggcctttggcctttgaagaagagctattgcggcgtggaggcggagctgaaggcg
caagaccgcaagggcgattggctcgacctgccgaagctcgccatggcggacgagaccgca
gcgcgtctgctcgtcgccatgccgggagtaaagtccggcctcgaccggcaccaatggctg
cgcagcggcacctgccagaccgagaatgcggaagcatatttctcgctgcagttgcgtctt
ctcgaccagctgaacggatcggcagtgagagccctctttgccgacaagatcggttcggag
atcggcgagctgcagatcaaagcggccttcgaccagagtttcggggcgggggctggcgac
cgggtacgcatgcgctgccagaccgtcgacggccgcagcgtgatcaccggactgaccatc
ggactttccggtgatctctctgacagggcggaccttggaagcctgatgaaagcggccggg
ccgaccgagttcaaatgcgccaaggggatcgccgacgcagccggacgaggctga
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