Sinorhizobium fredii USDA 257: USDA257_c47810
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Entry
USDA257_c47810 CDS
T02188
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein XylF
KO
K10543
D-xylose transport system substrate-binding protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
USDA257_c47810 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c47810 (xylF)
Transporters [BR:
sfd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
USDA257_c47810 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
DHQS
ABC_sub_bind
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AFL53317
UniProt:
I3XBR1
LinkDB
All DBs
Position
4958637..4959674
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AA seq
345 aa
AA seq
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MKSILKLMAGAAIIASMHSAAVAKDLVVGVSWSNFQEERWKTDEAAIKAALEASGDKYIS
ADAQSSAAKQLTDIESLIAQGANALIVLAQDSDAIAPAIEKATAEGIPVVGYDRLIENPA
AFYITFDNKEVGRMQAREVFKAKPEGNFVFIKGSSSDPNADFLFSGQMEVLKEAVDAGKV
KNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAALDAQGLAGSVPV
SGQDADKAALNRVALGTQTVSVWKDSRELGKRAAEIAAELASGKKMEEVAGVSTFNGGPK
GVAMQSVFLAPLPITKDNLNVVIEAGWISKEEACQGVQGDIAACK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccattttgaagctgatggcaggggctgccatcatcgcgtccatgcattccgca
gcagtcgccaaggacctcgttgtcggcgtctcctggtcgaacttccaggaagagcgctgg
aaaaccgacgaggccgccatcaaggccgcacttgaagcctccggcgacaaatatatttcc
gctgacgcacagtcttcggctgccaagcagctcaccgacatcgaatcgctgatcgcccag
ggcgccaacgcgctgatcgtgctggcgcaggattccgacgcgatcgccccggcgatcgaa
aaggccaccgccgagggcattccggtcgtcggctacgaccgcctgatcgagaacccggcc
gccttctacatcaccttcgacaacaaggaagtgggccgcatgcaggcccgcgaagtgttc
aaggcgaagccggagggcaacttcgtcttcatcaagggctcctcctccgatccgaacgcc
gacttcctcttctccggtcagatggaggtgcttaaggaagccgtcgacgccggcaaggtc
aagaatgtcggcgaggcctatacggacggctggaagccggaaaacgcccagaagaacatg
gagcagttcctgaccgccaacgacaacaaggtcgacgcggtcgtcgcctccaacgacggc
accgccggcggcgcgatcgcagcgcttgacgcgcagggccttgccggctcggttccggtc
tccggccaggacgccgacaaggcggcactgaaccgtgttgcgctcggcacgcagaccgtt
tcggtctggaaggactcgcgcgaactcggcaagcgcgccgccgagatcgccgccgaactg
gcaagcggcaagaagatggaagaagtcgccggcgtgagcaccttcaacggcggaccgaag
ggcgtcgccatgcagtcggtcttcctcgcaccgctgccgatcaccaaggacaacctgaac
gtcgtcatcgaggccggctggatttccaaggaagaagcctgccagggcgtccagggtgac
atcgccgcgtgcaagtaa
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integrated database retrieval system
