Sinorhizobium fredii USDA 257: USDA257_c49970
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Entry
USDA257_c49970 CDS
T02188
Name
(GenBank) extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02010
ABC transporters
sfd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
USDA257_c49970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
USDA257_c49970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c49970
Transporters [BR:
sfd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
USDA257_c49970
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
AFL53530
UniProt:
I3XCC4
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All DBs
Position
complement(5179468..5180613)
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AA seq
381 aa
AA seq
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MRLHTTTAFGTLALILGLTAPAMADIRIGSTLSETGPAAFLGDPEAKTLKMLVEEINAAG
GVLGEKIELIVYDDGGDPNKARTFATRLVEDDEVVAVIGGTTTGTSMAILQVFEDAEIPF
ISLAGAIEIIDPVRPYTFKTPHTDRMACAKIFEDMKARGLTKIGMISGSDGFGASMHKQC
LQIVGDYGIEVLADETYGPSDADMTPQLTNIKGKEGVQAVLNAGFGQGPAIVTRNYQQLA
VGLPFYQSHGVASDAFIELAGASAAEGIRLPGTALLVAKLLPESDPQRPVVTAYKESYEK
ATGKPVSTFGGYAHDALRILVDALNRAGEAEPQAIRDAIEGTSGLVGTTGTVTMSAEDHL
GLDLSAFRMLEIKDGGWKLVE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcacaccaccaccgcatttggaacgctggcgcttattctcgggcttacggct
ccggcgatggccgatatccgcattggctcgactctctcggagacggggcccgccgccttc
ctcggcgatccggaggcgaagacgctgaagatgctggtcgaggagatcaatgccgcaggc
ggcgtcctcggcgagaagatcgaactgatcgtctatgacgatggcggcgaccccaacaag
gcgcgcacgttcgccacccgtcttgtcgaggacgacgaggtcgtcgccgtcatcggcggc
acgacgaccggcacctccatggcgatcctgcaggtcttcgaagacgcggagatccccttc
atctcgctcgccggcgcgatcgagatcatcgatccggtccgcccctataccttcaagaca
ccgcacaccgaccgcatggcctgcgccaagatcttcgaggacatgaaggcccgcggcctc
accaagatcggcatgatctccggctccgacggcttcggcgcatcgatgcacaagcagtgc
ctgcagatcgtcggcgactacggcatcgaggtgctggccgacgaaacctatgggccgagc
gatgccgacatgacgccgcagctcaccaacatcaaggggaaggaaggcgtgcaggcggtc
ctcaatgccggatttggccaagggccggcgattgtcacccgcaactaccaacagctcgcc
gtcgggctgcccttctatcagtcgcacggggttgcctccgatgccttcatcgaacttgcc
ggcgcctcggcggccgagggcatccgcttgccgggtacggcgctgctggtggcgaaactg
ctcccggaaagcgatccgcagcgcccggtcgtcaccgcctataaggaaagctacgagaag
gcgacgggcaagccggtttccaccttcggcggctacgcgcatgacgcgctgcgcatcctc
gtcgatgcgctcaatcgcgccggcgaagcggaaccgcaggcgatccgcgacgcgatcgaa
ggcacatcgggccttgtcggcaccacgggcaccgtcaccatgtcggcggaggatcacctc
ggcctcgatctcagcgccttccggatgctcgagatcaaggacggtggctggaagctggtc
gaatag
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