Sinorhizobium fredii USDA 257: USDA257_c50580
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Entry
USDA257_c50580 CDS
T02188
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase LysA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00300
Lysine biosynthesis
sfd00470
D-Amino acid metabolism
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
sfd01120
Microbial metabolism in diverse environments
sfd01230
Biosynthesis of amino acids
Module
sfd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
USDA257_c50580 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
USDA257_c50580 (lysA)
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
USDA257_c50580 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6003
Motif
Other DBs
NCBI-ProteinID:
AFL53584
UniProt:
I3XCH8
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All DBs
Position
5247974..5249242
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AA seq
422 aa
AA seq
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MNHFDYRDGILYAEDVPVTDIARAVGTPFYCYSTATLERHYRVFAQAFADVDAMVCYAVK
ANSNQAVLKTLGRLGAGVDVVSEGELRRALAAGIPADRIMFSGVGKTPREMDLGLEAGIY
CFNVESEPELEILNQRAVRAGKQAHVSFRINPDVDARTHAKISTGKKENKFGISWERARA
VYAHAATLPGIKVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHVIDHVDIGGGL
GIPYREDNNPPPLPDAYADIVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVKISAANAPRIKADVVGPVCETGDYLALDREMAM
PKPGDLFAIGSAGAYGAVQSGTYNSRLLVPEVLVRGDRFHLIRPRKDYDALIGLDSVPDW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcatttcgactatcgcgacggaattctctacgccgaagacgtgcccgtgacggat
atcgcccgcgccgtcggcacgccgttctattgctattcgaccgcgaccctcgagcgacac
taccgggtcttcgcacaagcctttgccgacgtcgatgcgatggtctgctatgcggtgaag
gccaattccaaccaggccgtgctgaagacgctcggccgcctcggcgcgggtgtcgacgtg
gtctcggaaggtgaactccgccgggcgctcgccgccggcatcccggcagaccggatcatg
ttttccggcgtcggcaagacgccacgcgaaatggatctggggcttgaggccggcatctat
tgcttcaacgtcgaatcggagccggagctggaaatcctcaaccagcgcgccgtgcgcgcc
ggcaagcaggcgcatgtctccttccgcatcaatccggacgtcgacgcacgcacgcacgcg
aagatttcgaccggcaagaaggaaaacaagttcggcatttcctgggagcgggcgcgcgcc
gtctatgcccacgccgcgacgctcccgggcatcaaggtgaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcctttcgatgatgccttcaagctgttgcgcgagctg
gtcgatacgctgcgctccgacggccacgtcatcgatcacgtcgacattggcggcggcctc
ggcatcccttatcgtgaagacaacaacccgccgccgctccccgatgcctatgccgacatc
gtcaagaatcagctcaagggcctcgactgcaagatcgtcaccgaaccggggcggctgatc
gtcggcaatgccggcattctcgtcaccgaagtgatctatgtgaaggatggcggcgaaaag
acctttgtcatcgtcgatggggcgatgaacgacctgatccgcccgacgctctacgaggcc
tatcacgagatcaggccggtgaagatttccgccgccaatgcgccgcgcatcaaggccgac
gtggtcggcccggtctgcgagacgggcgactatctggcgctcgatcgggagatggcgatg
ccgaagccgggcgatcttttcgcgataggctcagcgggcgcctacggtgcggtccagtcc
ggcacctacaacagccggctcttggtccccgaggttctcgtcaggggcgatcgtttccat
ttgatccgtccgcgcaaggattatgacgctctgatcggcctcgactcggtgccggattgg
ctcgactga
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