Sinorhizobium fredii USDA 257: USDA257_c51150
Help
Entry
USDA257_c51150 CDS
T02188
Symbol
ytcB
Name
(GenBank) putative UDP-glucose epimerase YtcB
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00520
Amino sugar and nucleotide sugar metabolism
sfd01100
Metabolic pathways
sfd01250
Biosynthesis of nucleotide sugars
Module
sfd_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
USDA257_c51150 (ytcB)
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
USDA257_c51150 (ytcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AFL53641
UniProt:
I3XCN5
LinkDB
All DBs
Position
complement(5301948..5302988)
Genome browser
AA seq
346 aa
AA seq
DB search
MAKRNGANRGKVILVAGGAGFVGSHLCSALLAAGNRVICLDSYLTGSPANVAGLQRNPYF
TMVEQDVCDEITSDEPLDAIYNLACPASPPSYQADPIHTMMTSVTGTGNLLRLAARHGAR
FLQASTSEIYGDPQEHPQQEEYWGHVNCTGPRACYDEGKRAAETLCFDSLRAGSVDAKVA
RIFNTYGPHMRPNDGRIVSNFIVQALNNEPLTVYGSGEQTRSFCFVSDLVEGLVKLMNRD
PNPGVPVNLGNPGEFTVIELAELVLSKVRTASTIAYAPLPPDDPQRRRPDISRAKSLLGW
EPKVPLQEGLTHTIAWFERMIPKQRPVRRGGRSELQPKMSVLSQDL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaaacggagcaaatcgcgggaaggtcatcctcgttgccggcggggccggc
ttcgtcgggtcccacctttgttcagccctgcttgctgccggcaatcgggtgatctgcctc
gacagctatctgacgggatccccggccaatgtcgccggccttcagcgcaacccgtacttc
accatggtcgaacaggatgtctgcgacgagatcaccagcgatgagccgctcgacgcgatc
tacaatctcgcttgccccgcctcgccgccgtcctaccaggccgacccgatccatacgatg
atgaccagcgtgaccggaaccggaaatctgctgcggcttgccgcacgccacggtgccagg
ttcctccaggcctcgacgagcgagatctacggcgatccgcaggagcatccgcagcaggag
gagtattgggggcatgtcaattgcaccggtccgcgggcttgctacgacgaaggcaagcgg
gcggccgagacgctgtgcttcgacagcctgcgcgccggcagcgtcgacgcaaaagtggcg
cgcatcttcaacacctacggcccgcacatgcgtccgaacgacgggcggatcgtgtcgaac
ttcatcgttcaggcactgaacaacgagccgctgacggtttatggcagcggcgagcagacg
cggtccttctgttttgtgtccgatctcgtcgaaggattggttaagttgatgaatcgcgat
ccgaatccaggtgtaccggtgaacctcggcaatccgggcgagtttaccgtcatcgaactg
gccgaactcgtgctttccaaagtcaggacggcgtcgacgatcgcctacgcgcccttgccg
cccgatgatccgcagcgccgccggcccgatatctcccgggcaaaatcacttctcggctgg
gagccgaaggttccgctgcaggaggggctgacgcacaccattgcctggttcgagaggatg
attccgaagcaaaggccagtgcgccggggcggccgttccgagcttcagccgaaaatgtcc
gtcctctctcaggatctttga
DBGET
integrated database retrieval system
