KEGG   Sinorhizobium fredii USDA 257: USDA257_c53990
Entry
USDA257_c53990    CDS       T02188                                 
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    USDA257_c53990 (ung)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfd03400]
    USDA257_c53990 (ung)
Enzymes [BR:sfd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     USDA257_c53990 (ung)
DNA repair and recombination proteins [BR:sfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     USDA257_c53990 (ung)
 Prokaryotic type
     USDA257_c53990 (ung)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AFL53922
UniProt: I3XDG6
LinkDB
Position
complement(5608942..5609667)
AA seq 241 aa
MDATIRLEESWKAVLTPEFRHGYMAELKRFLVDEKQQGRQIFPRGSEYFRALDLTPLDKV
RVVILGQDPYHGDGQAHGLCFSVRPGVRTPPSLVNIYKELRDDLGISPARHGFLESWARQ
GVLLLNSVLTVERGRAASHQGKGWERFTDAVIRAVNEQAQPVVFMLWGSYAQKKAAFVDR
SRHLVLTAPHPSPLSAHSGFLGCKHFSKANAFLQSKGLDPIDWRLPDDPPLAVDRQIAAP
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atggatgcgacgatcaggctggaggagagctggaaggccgtgctgacgccggaattccgg
catggctacatggccgagctcaagcgctttcttgtggacgagaagcagcagggccggcag
atctttccgagaggcagcgagtatttccgggcgcttgacctgacgccgctcgacaaggtc
cgcgtcgtcatccttggccaggatccctatcatggcgacggccaggcgcacgggctttgc
ttcagcgtacggccgggtgtgcgcaccccgccgtcgctcgtcaacatctacaaggagctt
cgcgacgacctcggcatttcaccggcccgtcacggtttcctcgaaagctgggcgcgtcag
ggtgtgctgctgttgaacagcgtgctgacggtggagcggggccgggccgcctcgcaccag
ggcaagggctgggaacgctttaccgacgcggtcatccgcgccgtcaacgagcaggcgcag
ccggtcgtcttcatgctttggggctcctacgcgcagaagaaagctgccttcgtcgatcgc
tcccggcacctggtgctgactgcgccgcatccgtcgccgctctcggcgcattccggcttc
ctcggctgcaagcatttttcgaaagccaatgccttcctgcagtcgaaggggctcgatccg
atcgactggcggctgccggacgaccctcctctcgccgtcgatcggcagattgcggcgccc
tgctga

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