Sinorhizobium fredii USDA 257: USDA257_c55280
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Entry
USDA257_c55280 CDS
T02188
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c55280
Transporters [BR:
sfd02000
]
Other transporters
Pores ion channels [TC:
1
]
USDA257_c55280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AFL54043
UniProt:
I3XDT7
LinkDB
All DBs
Position
5736948..5742569
Genome browser
AA seq
1873 aa
AA seq
DB search
MNQVIGTFGSALRYFFAFLGAALVALVLLVAFLGFTVPGARVVAWAIEKYAATPDQIVRI
SDPGALLTGDFTAGTVTLFDGEGIYAEVRDLSVAWTPAELLSMRFDASSISAASVRLERL
PVPSTETKEVRSTLALPVDVNIDALDLKEVVIGKAIAGQDQFLTAKGRVNATNSSIALAF
DAAERDRPEARAVADLVFNPAGNELKLEAEVAEPKGGLLAKLLRLPGEPSVDIQLTGQGP
LSDWTGSGTASLDGSEILRLEGQHVLTADGMHNLKLSGGGAFAQLMPPAFRPLFEGSTSI
DLTAAFDEKSRVRIEAGKVATGSLTLNASGTVDSRGENNLQASVAGASGPFDFRWPLKDG
ELQARINTANLSLIGDGQSAILDIAADVASLGLPQGNLGAIRLSAQSDAFNLETQSGSLK
TAVEIGETRFASADLDRAIQAPVKLAGTIAIAPDDIRFDPVTIESASIGGSVTGSLDRAD
ISLEAAFKLFAVPAVLPTGLAEKFEKTIAVSGNLVTEEDGSVQVSGLELQSEAVEASGSL
TLSGETLTADLKGTVPDLGRFLPEAKGSAAFQAAASGPLSKLGVKAEIKSSGATLAGRSL
SDLTINADATATPGSPEAKLSATGTLDGQVIDIRADVVSKDGRTSVPALEAKIGGNTLTG
AIDLTADFKPNGKLDFSLPDLGLLAAMVGQQASGDLAGSATLQTVNGVTSVAIKASGSSV
QRDALTIAKPAVDLGIADIARLAIKGTVSAESIAQGENRVSDLNLAFEQQGGRTGFSAEG
LYDGAPLTAAGELTSDAGRTEIRLASLAATPRRLPLQLAEPTLIAIEGGIVRLDGLTIQA
STGTVTVSGTAGDRLDLSARLNDLPAVLINSFAPTLGAEGIVAGTVDIDGETQAPVVAYD
LAWRGASVSSLRSGGLAAQDLTAKGTVTVTETTISFDPTTIESPGFRGNLTGSLARAEKT
ATANFEVQAEPSFLPGGLATRFDTPVTVSGKVETGGDGSVKLSALEVQSGTVDASGSATI
AGGQLTADVEGTLPDLGKLLADAEGKAGFNAAISGPLDALAIKGELTSSGARLAGRSLSD
LIVTADATVKPGSPQAKLTATGGLDGQAIDVRAEVVSTEGRTSIPTLEAKIGDNRVTGAI
DLTADFKPNGTIDFNLPDLGLVAAMAGQKASGDLSGSASIATANGVTSVSVKASGSNIKH
DALTIAKPAADIRIADIAALAIRGTVRAESVAQGQNRISAVNLTFEQQGGRTGFDVAGQY
DGAPLSAKGDLASAGDLTEIRLASFAAAPRRLPLKLARPTVVAIENGVVRLGDLTIQASR
GTIAVAGTAGATLDISAKLNALPAALINTFAAALGAEGTIDGTVELSGTAAAPIVNYDLR
WSGASVAAARGAGVSGLQISAKGRFAGNRVTLDATVSGPGGLSFRGGGQVDVGGNMPMSM
KFAGDVPFALLAGTLAEQGFTLTGAAKVDLSLSGSARAPQITGTVSTAGGRLVDVRRNLA
LNDLAANVTLDGSQATITRLSGNLASGGSIEASGTVGIAAGSNFPADLRIRLNNATYVDG
TVFTANLAGDLTLKGPLVATPVLGGQLTIRRAAITVPERLPTSLSAIDIKHRNAPAGVRQ
MARDVRRETSASGGAGVNAGGVIAFDLAVHSPGQFFVRGRGIDAELGGDLTIRGTAVRPI
VSGDFDMRRGRLEILGKRLTFTDGHIGFGGDLIPTLDLDATSSAGSTTITVNIAGPANNP
TVTFSSSPALPQDEILAQLIFNRSLNNLSAFQIAQLASAVSQLAGGGSTSLLDGLRNKLG
VDDLDITTDESGGAQVRAGKYLNDRTYLELQQGSDSASSKAIINLDIGRGVKLKGEAAGD
GAAAGGIFFEREY
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggtcatcggcacatttggatcagcgctgcgctactttttcgcctttctcggc
gcagctttggtcgcgttggttctcctcgtcgcgtttctgggcttcaccgtgcccggcgcg
cgcgtcgtcgcctgggcgatcgaaaaatatgcggcaacccccgaccagatcgtccgaatc
tccgatccgggcgcgctgctcaccggcgacttcaccgccggaaccgtgacgctcttcgac
ggcgaggggatttatgcggaggtccgcgacctctcggtcgcctggaccccggccgaactt
ctgtcgatgcgcttcgatgcaagcagcatctcggcggcttccgtccgcctcgagcggctg
ccggtcccctccaccgaaacgaaagaggtgcgaagcacactcgccctgccggtggacgtg
aacatcgatgccctcgatctcaaggaggtcgtcatcggcaaggcgatcgccggccaggac
cagttcctgaccgccaaaggcagggtcaacgccaccaactcgagcatcgcactcgccttc
gatgcggccgaacgtgaccggcccgaggcgcgcgccgtcgccgatctcgtcttcaatccg
gccggaaacgagctgaagctcgaggctgaggtcgccgaacccaagggcggactgctggcg
aaactgctgcggctgccgggcgaaccttcggtcgatatccagctcaccggacaaggaccc
ctctccgactggacgggctccggcaccgcatcgctcgacggcagcgagattctgcggctt
gagggacaacacgtgctgacggccgacggcatgcacaacctgaagctctccggcggcggt
gctttcgcccagctgatgccgcccgccttcaggccgcttttcgagggatcgaccagcatc
gacctgaccgccgccttcgacgaaaagagccgtgtccggatcgaagcgggcaaggttgcg
accggctccctgacgctgaacgcctcgggaacggttgacagccgcggcgagaacaacctt
caggcaagcgtagccggcgccagcggcccgttcgatttccgctggccgctgaaggacgga
gagctgcaggcacggatcaacaccgccaacctgtcgctgattggcgatggacaatcggcg
atcctcgacatcgccgccgatgtcgcctcgctcggcctgccgcaggggaatctcggcgcc
atccggctctcggcgcaaagcgacgccttcaacctcgaaacgcagtcggggtcgctgaag
acggccgtggaaatcggcgaaacccgcttcgcaagcgccgatcttgaccgggcgatccag
gctcccgtgaagctcgccggaacgatcgcgatcgcaccggacgacatccgcttcgacccc
gtgacgatcgagagcgccagcatcggcggctccgtgacgggcagcctcgatcgcgccgat
atctcgctcgaggcggcattcaagctctttgccgttccggccgtgctgccgacggggctc
gcggaaaagttcgagaagacgattgccgtctccggcaatctggtgaccgaagaggacggc
agcgtccaggtgagcggcctcgaactccaatccgaagcggtcgaggcctccggctcgctc
acactttcaggcgagaccctgacggccgatttaaagggcacggtcccagatctcggccga
tttctgcctgaggcaaaaggtagcgcggccttccaggccgccgcctccggtccgttgagc
aagctcggcgtcaaggcggagataaagtcgagcggcgcgacgctcgccgggcgcagcttg
agcgatctgacgatcaatgccgatgcgacggcgacgcccggcagccccgaggcgaagctc
tccgccaccggcacgctcgacggtcaggtgatcgacattcgcgccgacgtggtctcgaaa
gacggccgcacgtccgttcccgcactcgaagcgaaaatcggcggcaacacgctcaccggc
gcgatcgacctgacggcggacttcaagccgaacggcaagctcgacttcagcctcccagac
cttgggcttctcgccgccatggtcggccagcaggcctccggtgaccttgccggttcggca
acgctgcagaccgtaaacggcgtcacgtcggtcgcaatcaaggccagcggcagcagcgtg
cagcgcgacgcgctgacgatcgccaaaccggcggtcgatctcggtatcgcagacattgcc
aggctcgcgatcaagggcactgtcagcgcggagagcatagcgcagggtgaaaaccgggtc
tcggacctcaatctcgctttcgaacagcagggcggccgtaccggcttttcggccgagggc
ctctatgacggcgcaccgttgacggcggcgggcgagctgacaagcgacgccggccgcacc
gagatccgcctcgcttccctcgcggcgacaccgaggcgactgccgctgcaactcgcagag
ccgaccctgatcgcgatcgaagggggcatcgttcgcctcgacggcctgaccatccaggcg
tcgacgggtactgttaccgtctccggcaccgccggcgacaggctcgacctcagcgcgagg
ctgaacgatctgcccgccgtgctcatcaatagcttcgcgccgacccttggcgcggaaggc
atcgttgccggcaccgtcgatatcgacggtgaaacgcaggcgccggtggtcgcctacgac
ctcgcctggcgcggcgcatccgtatcctctttgcgatccggcggacttgccgcgcaggat
ctgaccgccaagggcacggtcaccgtaacggaaacaaccatcagcttcgatccgacgacg
atcgaaagccccggtttccgcggcaatctcaccggcagcctcgcccgtgccgagaaaacg
gcaacggcgaatttcgaagtccaggccgagccgagctttctgccgggcggtctggcaacg
aggttcgacacaccggtgaccgtctcggggaaggtcgagaccggcggcgatggcagcgtc
aagctgagcgccctcgaggtccagtccggcacggtcgacgccagcggttcggcgaccatc
gccggaggccagctgacggccgatgtggagggcacgctgcccgatctcggcaagctgctc
gccgatgcggaaggcaaggctggcttcaacgccgcgatttccggaccgctcgatgcgctc
gccatcaagggagagctgacttcgagcggcgcaaggctggccggccgctcgctgtcggac
ctgatagtcaccgccgacgcaacggtcaaaccggggagcccgcaggcgaaactcaccgca
accggcgggctcgacggccaggcgatcgacgtcagggccgaagtggtttcaacggaaggc
cgcacatccatcccaacgctcgaggcgaagatcggcgacaatcgcgtgacgggcgcgatc
gacttgacggcggatttcaagccgaacggcaccatcgacttcaacctgcccgatctcggg
ctggtcgctgccatggccggccagaaggcgtccggggacctttcgggttcggcttcgatt
gcgactgcgaacggcgtgacctccgtctcggtcaaggccagcggcagcaacatcaagcac
gacgcgctgacgatcgccaagccggcggctgatatccgcatcgccgatatcgccgctctg
gcaatccgcggaaccgtcagggccgaaagcgtcgcacaggggcagaatcgcatctccgcc
gtcaacctgaccttcgaacagcagggcggcaggacaggcttcgatgtcgccggtcaatat
gacggcgctccgctctcggccaagggcgatctggcgagtgccggggacctcaccgaaatc
cgcctcgcttccttcgcggcagcgccgcggagactgccgctgaagcttgccagacctacg
gtcgtcgccattgagaatggtgtcgttcgcttgggcgacctgaccattcaggcatcgaga
ggcacgattgccgtcgccgggaccgccggcgcgacgctcgatatctcggcgaagctcaat
gccttgcccgccgccctgatcaacaccttcgcggcggcgctcggcgccgaagggacgatc
gacggaacggtcgaactcagcggcaccgccgctgcgccgatcgtcaactacgatctgcga
tggagcggtgcttcggttgcggctgcgcggggcgctggggtgtcggggctccaaatctcc
gcgaaggggcggtttgccggcaaccgcgtcacgcttgatgcgaccgtctcgggaccgggc
ggcctctccttccggggcggcggccaggtcgacgtcggcggcaacatgccgatgtcgatg
aaattcgccggcgacgttcccttcgccctgcttgccggcacgctcgccgagcagggcttc
accctcaccggcgcggcgaaggtcgatctttccctctccggttcggccagggcgccgcag
atcaccggtacggtctcgaccgccggcggccggctcgtcgacgtcaggcgcaatctcgcc
ctcaatgatcttgcggccaatgtcacgctcgacggcagtcaggcgacgatcactaggctt
tccggcaatcttgccagcggcggatccatcgaggcaagcggcacggtgggcatcgcggcc
ggctccaatttcccggccgacctcagaattcgcctcaacaacgccacctatgtcgacggc
accgtcttcaccgccaacctcgccggcgacctgacgctcaagggcccgctcgtcgccacg
cccgtgctgggcgggcaactgacgatccgcagggccgcgatcaccgtgccggaaaggctg
ccgacctcactctcggcgatcgacataaagcacaggaacgcgcctgccggggtgcggcag
atggcacgcgacgtgcgcagggaaacgtctgcatccggcggtgcgggcgtcaacgccggc
ggcgtcatcgccttcgatctcgccgtccactcgccggggcagttcttcgtgcgcgggcgc
ggcatcgatgccgaactcggcggcgacctgacgatccgcggcaccgccgtccggccgatc
gtctccggcgatttcgacatgcggcgcggccggctcgaaattctcggcaagcggctgact
ttcacggacggccatatcggcttcggcggcgaccttattccgacgctcgatctcgacgcc
acctcgagcgccggttcgaccaccattacggtcaacatcgccgggcccgccaacaacccg
acggtgaccttctcctcctctccggcgctgccgcaggacgagatccttgcgcagctgatc
ttcaaccgatcgctgaacaacctgtcggccttccagatcgcccagctcgcctccgccgtc
agccagctcgccggcggcggctcgacgtcgctgcttgacggcctgcgcaacaagctcggc
gtcgacgacctcgatatcaccaccgacgagagcggcggcgcccaggtgcgggccggcaag
tacctcaacgaccggacctatctcgaattgcagcaaggctcggattcggcctccagcaag
gcgatcattaatcttgacatcggccgcggcgtgaagctgaagggcgaggcggccggcgac
ggcgcggccgccggcggcatcttcttcgagcgagagtactag
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