KEGG   Sinorhizobium fredii USDA 257: USDA257_c55280
Entry
USDA257_c55280    CDS       T02188                                 
Name
(GenBank) hypothetical protein
  KO
K09800  translocation and assembly module TamB
Organism
sfd  Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sfd02000]
    USDA257_c55280
Transporters [BR:sfd02000]
 Other transporters
  Pores ion channels [TC:1]
   USDA257_c55280
SSDB
Motif
Pfam: TamB
Other DBs
NCBI-ProteinID: AFL54043
UniProt: I3XDT7
LinkDB
Position
5736948..5742569
AA seq 1873 aa
MNQVIGTFGSALRYFFAFLGAALVALVLLVAFLGFTVPGARVVAWAIEKYAATPDQIVRI
SDPGALLTGDFTAGTVTLFDGEGIYAEVRDLSVAWTPAELLSMRFDASSISAASVRLERL
PVPSTETKEVRSTLALPVDVNIDALDLKEVVIGKAIAGQDQFLTAKGRVNATNSSIALAF
DAAERDRPEARAVADLVFNPAGNELKLEAEVAEPKGGLLAKLLRLPGEPSVDIQLTGQGP
LSDWTGSGTASLDGSEILRLEGQHVLTADGMHNLKLSGGGAFAQLMPPAFRPLFEGSTSI
DLTAAFDEKSRVRIEAGKVATGSLTLNASGTVDSRGENNLQASVAGASGPFDFRWPLKDG
ELQARINTANLSLIGDGQSAILDIAADVASLGLPQGNLGAIRLSAQSDAFNLETQSGSLK
TAVEIGETRFASADLDRAIQAPVKLAGTIAIAPDDIRFDPVTIESASIGGSVTGSLDRAD
ISLEAAFKLFAVPAVLPTGLAEKFEKTIAVSGNLVTEEDGSVQVSGLELQSEAVEASGSL
TLSGETLTADLKGTVPDLGRFLPEAKGSAAFQAAASGPLSKLGVKAEIKSSGATLAGRSL
SDLTINADATATPGSPEAKLSATGTLDGQVIDIRADVVSKDGRTSVPALEAKIGGNTLTG
AIDLTADFKPNGKLDFSLPDLGLLAAMVGQQASGDLAGSATLQTVNGVTSVAIKASGSSV
QRDALTIAKPAVDLGIADIARLAIKGTVSAESIAQGENRVSDLNLAFEQQGGRTGFSAEG
LYDGAPLTAAGELTSDAGRTEIRLASLAATPRRLPLQLAEPTLIAIEGGIVRLDGLTIQA
STGTVTVSGTAGDRLDLSARLNDLPAVLINSFAPTLGAEGIVAGTVDIDGETQAPVVAYD
LAWRGASVSSLRSGGLAAQDLTAKGTVTVTETTISFDPTTIESPGFRGNLTGSLARAEKT
ATANFEVQAEPSFLPGGLATRFDTPVTVSGKVETGGDGSVKLSALEVQSGTVDASGSATI
AGGQLTADVEGTLPDLGKLLADAEGKAGFNAAISGPLDALAIKGELTSSGARLAGRSLSD
LIVTADATVKPGSPQAKLTATGGLDGQAIDVRAEVVSTEGRTSIPTLEAKIGDNRVTGAI
DLTADFKPNGTIDFNLPDLGLVAAMAGQKASGDLSGSASIATANGVTSVSVKASGSNIKH
DALTIAKPAADIRIADIAALAIRGTVRAESVAQGQNRISAVNLTFEQQGGRTGFDVAGQY
DGAPLSAKGDLASAGDLTEIRLASFAAAPRRLPLKLARPTVVAIENGVVRLGDLTIQASR
GTIAVAGTAGATLDISAKLNALPAALINTFAAALGAEGTIDGTVELSGTAAAPIVNYDLR
WSGASVAAARGAGVSGLQISAKGRFAGNRVTLDATVSGPGGLSFRGGGQVDVGGNMPMSM
KFAGDVPFALLAGTLAEQGFTLTGAAKVDLSLSGSARAPQITGTVSTAGGRLVDVRRNLA
LNDLAANVTLDGSQATITRLSGNLASGGSIEASGTVGIAAGSNFPADLRIRLNNATYVDG
TVFTANLAGDLTLKGPLVATPVLGGQLTIRRAAITVPERLPTSLSAIDIKHRNAPAGVRQ
MARDVRRETSASGGAGVNAGGVIAFDLAVHSPGQFFVRGRGIDAELGGDLTIRGTAVRPI
VSGDFDMRRGRLEILGKRLTFTDGHIGFGGDLIPTLDLDATSSAGSTTITVNIAGPANNP
TVTFSSSPALPQDEILAQLIFNRSLNNLSAFQIAQLASAVSQLAGGGSTSLLDGLRNKLG
VDDLDITTDESGGAQVRAGKYLNDRTYLELQQGSDSASSKAIINLDIGRGVKLKGEAAGD
GAAAGGIFFEREY
NT seq 5622 nt   +upstreamnt  +downstreamnt
atgaatcaggtcatcggcacatttggatcagcgctgcgctactttttcgcctttctcggc
gcagctttggtcgcgttggttctcctcgtcgcgtttctgggcttcaccgtgcccggcgcg
cgcgtcgtcgcctgggcgatcgaaaaatatgcggcaacccccgaccagatcgtccgaatc
tccgatccgggcgcgctgctcaccggcgacttcaccgccggaaccgtgacgctcttcgac
ggcgaggggatttatgcggaggtccgcgacctctcggtcgcctggaccccggccgaactt
ctgtcgatgcgcttcgatgcaagcagcatctcggcggcttccgtccgcctcgagcggctg
ccggtcccctccaccgaaacgaaagaggtgcgaagcacactcgccctgccggtggacgtg
aacatcgatgccctcgatctcaaggaggtcgtcatcggcaaggcgatcgccggccaggac
cagttcctgaccgccaaaggcagggtcaacgccaccaactcgagcatcgcactcgccttc
gatgcggccgaacgtgaccggcccgaggcgcgcgccgtcgccgatctcgtcttcaatccg
gccggaaacgagctgaagctcgaggctgaggtcgccgaacccaagggcggactgctggcg
aaactgctgcggctgccgggcgaaccttcggtcgatatccagctcaccggacaaggaccc
ctctccgactggacgggctccggcaccgcatcgctcgacggcagcgagattctgcggctt
gagggacaacacgtgctgacggccgacggcatgcacaacctgaagctctccggcggcggt
gctttcgcccagctgatgccgcccgccttcaggccgcttttcgagggatcgaccagcatc
gacctgaccgccgccttcgacgaaaagagccgtgtccggatcgaagcgggcaaggttgcg
accggctccctgacgctgaacgcctcgggaacggttgacagccgcggcgagaacaacctt
caggcaagcgtagccggcgccagcggcccgttcgatttccgctggccgctgaaggacgga
gagctgcaggcacggatcaacaccgccaacctgtcgctgattggcgatggacaatcggcg
atcctcgacatcgccgccgatgtcgcctcgctcggcctgccgcaggggaatctcggcgcc
atccggctctcggcgcaaagcgacgccttcaacctcgaaacgcagtcggggtcgctgaag
acggccgtggaaatcggcgaaacccgcttcgcaagcgccgatcttgaccgggcgatccag
gctcccgtgaagctcgccggaacgatcgcgatcgcaccggacgacatccgcttcgacccc
gtgacgatcgagagcgccagcatcggcggctccgtgacgggcagcctcgatcgcgccgat
atctcgctcgaggcggcattcaagctctttgccgttccggccgtgctgccgacggggctc
gcggaaaagttcgagaagacgattgccgtctccggcaatctggtgaccgaagaggacggc
agcgtccaggtgagcggcctcgaactccaatccgaagcggtcgaggcctccggctcgctc
acactttcaggcgagaccctgacggccgatttaaagggcacggtcccagatctcggccga
tttctgcctgaggcaaaaggtagcgcggccttccaggccgccgcctccggtccgttgagc
aagctcggcgtcaaggcggagataaagtcgagcggcgcgacgctcgccgggcgcagcttg
agcgatctgacgatcaatgccgatgcgacggcgacgcccggcagccccgaggcgaagctc
tccgccaccggcacgctcgacggtcaggtgatcgacattcgcgccgacgtggtctcgaaa
gacggccgcacgtccgttcccgcactcgaagcgaaaatcggcggcaacacgctcaccggc
gcgatcgacctgacggcggacttcaagccgaacggcaagctcgacttcagcctcccagac
cttgggcttctcgccgccatggtcggccagcaggcctccggtgaccttgccggttcggca
acgctgcagaccgtaaacggcgtcacgtcggtcgcaatcaaggccagcggcagcagcgtg
cagcgcgacgcgctgacgatcgccaaaccggcggtcgatctcggtatcgcagacattgcc
aggctcgcgatcaagggcactgtcagcgcggagagcatagcgcagggtgaaaaccgggtc
tcggacctcaatctcgctttcgaacagcagggcggccgtaccggcttttcggccgagggc
ctctatgacggcgcaccgttgacggcggcgggcgagctgacaagcgacgccggccgcacc
gagatccgcctcgcttccctcgcggcgacaccgaggcgactgccgctgcaactcgcagag
ccgaccctgatcgcgatcgaagggggcatcgttcgcctcgacggcctgaccatccaggcg
tcgacgggtactgttaccgtctccggcaccgccggcgacaggctcgacctcagcgcgagg
ctgaacgatctgcccgccgtgctcatcaatagcttcgcgccgacccttggcgcggaaggc
atcgttgccggcaccgtcgatatcgacggtgaaacgcaggcgccggtggtcgcctacgac
ctcgcctggcgcggcgcatccgtatcctctttgcgatccggcggacttgccgcgcaggat
ctgaccgccaagggcacggtcaccgtaacggaaacaaccatcagcttcgatccgacgacg
atcgaaagccccggtttccgcggcaatctcaccggcagcctcgcccgtgccgagaaaacg
gcaacggcgaatttcgaagtccaggccgagccgagctttctgccgggcggtctggcaacg
aggttcgacacaccggtgaccgtctcggggaaggtcgagaccggcggcgatggcagcgtc
aagctgagcgccctcgaggtccagtccggcacggtcgacgccagcggttcggcgaccatc
gccggaggccagctgacggccgatgtggagggcacgctgcccgatctcggcaagctgctc
gccgatgcggaaggcaaggctggcttcaacgccgcgatttccggaccgctcgatgcgctc
gccatcaagggagagctgacttcgagcggcgcaaggctggccggccgctcgctgtcggac
ctgatagtcaccgccgacgcaacggtcaaaccggggagcccgcaggcgaaactcaccgca
accggcgggctcgacggccaggcgatcgacgtcagggccgaagtggtttcaacggaaggc
cgcacatccatcccaacgctcgaggcgaagatcggcgacaatcgcgtgacgggcgcgatc
gacttgacggcggatttcaagccgaacggcaccatcgacttcaacctgcccgatctcggg
ctggtcgctgccatggccggccagaaggcgtccggggacctttcgggttcggcttcgatt
gcgactgcgaacggcgtgacctccgtctcggtcaaggccagcggcagcaacatcaagcac
gacgcgctgacgatcgccaagccggcggctgatatccgcatcgccgatatcgccgctctg
gcaatccgcggaaccgtcagggccgaaagcgtcgcacaggggcagaatcgcatctccgcc
gtcaacctgaccttcgaacagcagggcggcaggacaggcttcgatgtcgccggtcaatat
gacggcgctccgctctcggccaagggcgatctggcgagtgccggggacctcaccgaaatc
cgcctcgcttccttcgcggcagcgccgcggagactgccgctgaagcttgccagacctacg
gtcgtcgccattgagaatggtgtcgttcgcttgggcgacctgaccattcaggcatcgaga
ggcacgattgccgtcgccgggaccgccggcgcgacgctcgatatctcggcgaagctcaat
gccttgcccgccgccctgatcaacaccttcgcggcggcgctcggcgccgaagggacgatc
gacggaacggtcgaactcagcggcaccgccgctgcgccgatcgtcaactacgatctgcga
tggagcggtgcttcggttgcggctgcgcggggcgctggggtgtcggggctccaaatctcc
gcgaaggggcggtttgccggcaaccgcgtcacgcttgatgcgaccgtctcgggaccgggc
ggcctctccttccggggcggcggccaggtcgacgtcggcggcaacatgccgatgtcgatg
aaattcgccggcgacgttcccttcgccctgcttgccggcacgctcgccgagcagggcttc
accctcaccggcgcggcgaaggtcgatctttccctctccggttcggccagggcgccgcag
atcaccggtacggtctcgaccgccggcggccggctcgtcgacgtcaggcgcaatctcgcc
ctcaatgatcttgcggccaatgtcacgctcgacggcagtcaggcgacgatcactaggctt
tccggcaatcttgccagcggcggatccatcgaggcaagcggcacggtgggcatcgcggcc
ggctccaatttcccggccgacctcagaattcgcctcaacaacgccacctatgtcgacggc
accgtcttcaccgccaacctcgccggcgacctgacgctcaagggcccgctcgtcgccacg
cccgtgctgggcgggcaactgacgatccgcagggccgcgatcaccgtgccggaaaggctg
ccgacctcactctcggcgatcgacataaagcacaggaacgcgcctgccggggtgcggcag
atggcacgcgacgtgcgcagggaaacgtctgcatccggcggtgcgggcgtcaacgccggc
ggcgtcatcgccttcgatctcgccgtccactcgccggggcagttcttcgtgcgcgggcgc
ggcatcgatgccgaactcggcggcgacctgacgatccgcggcaccgccgtccggccgatc
gtctccggcgatttcgacatgcggcgcggccggctcgaaattctcggcaagcggctgact
ttcacggacggccatatcggcttcggcggcgaccttattccgacgctcgatctcgacgcc
acctcgagcgccggttcgaccaccattacggtcaacatcgccgggcccgccaacaacccg
acggtgaccttctcctcctctccggcgctgccgcaggacgagatccttgcgcagctgatc
ttcaaccgatcgctgaacaacctgtcggccttccagatcgcccagctcgcctccgccgtc
agccagctcgccggcggcggctcgacgtcgctgcttgacggcctgcgcaacaagctcggc
gtcgacgacctcgatatcaccaccgacgagagcggcggcgcccaggtgcgggccggcaag
tacctcaacgaccggacctatctcgaattgcagcaaggctcggattcggcctccagcaag
gcgatcattaatcttgacatcggccgcggcgtgaagctgaagggcgaggcggccggcgac
ggcgcggccgccggcggcatcttcttcgagcgagagtactag

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