Sinorhizobium fredii USDA 257: USDA257_c55360
Help
Entry
USDA257_c55360 CDS
T02188
Symbol
yrhE
Name
(GenBank) putative formate dehydrogenase YrhE
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00630
Glyoxylate and dicarboxylate metabolism
sfd00680
Methane metabolism
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
sfd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
USDA257_c55360 (yrhE)
09102 Energy metabolism
00680 Methane metabolism
USDA257_c55360 (yrhE)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
USDA257_c55360 (yrhE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_21
Fer4_9
Fer4_8
Fer4_2
Fer4_15
Fer4_16
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AFL54051
UniProt:
I3XDU5
LinkDB
All DBs
Position
complement(5748566..5751445)
Genome browser
AA seq
959 aa
AA seq
DB search
MNMVREIDYGTPASKSEKLVTLTIDGREISVPEGTSIMRAAMEAGVEVPKLCASDMMEAF
GSCRLCLVEIEGRAGMPASCTTPVAPGISVSTQTQRLKDVRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYDGANHVKARNNGEINRQWAPKDESNPYFTFDPAKCIV
CSRCVRACEEVQGTFALTISGRGFDSRVSAGMSEDFVSSECVSCGACVQACPTATLTEKS
VIEIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
NHKDRVLNPMVRDKVTDPWREVTWEEAFAHVASEFRRIQYQYGRDSVGGITSSRCTNEET
YLVQKLVRAGFGNNNVDTCARVCHSPTGYGLNQTFGTSAGTQNFDSVEHTDVAIIIGANP
TDGHPVFASRLKKRLREGAKLIVIDPRRIDLVRSAHVEASYHLPIKPGTNVAILTALAHV
IVTEGLANEAFIRERCDWSEFEDWAAFVAEPHHSPEATEAYTGVPAELVRGAARLYATGG
NGAIYYGLGVTEHSQGSTTVMAIANLAMVTGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRETFEKLWGVTLNNEPGLRIPNMLDAAVEGTFKALYIQGEDILQSDP
DTKHVAAGLAAMECVVVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRRVMR
PKNGYADWEVTQKLAQAMRLDWNYGHPSEIMDEIAATTPTFAMVSYDYLDKMGSVQWPCN
EKAPLGSPIMHVDGFVRGKGKFIRTEYVPTDERTGPRFPLLLTTGRILSHYNVGAQTRRT
ENVVWHPEDRLEIHPHDAEQRGIRDGDWIRLASRSGETTLRALITDRVAPGVVYTTFHHP
TTQANVITTDFSDWATNCPEYKVTAVQVSPSNGPSDWQVDYDEQARQSRRIAGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggtgcgtgaaatcgactatggcactcctgcttccaaatccgaaaagctggtg
acgctgacgatcgacgggcgggagatcagcgtgccggaaggcacgtcgatcatgcgggcg
gcgatggaagcgggcgtcgaggtgccgaagctctgcgcctcggacatgatggaggccttc
ggctcctgccggctctgtctggtggagatcgaggggcgggccggcatgccggcctcctgc
acgacgccggtcgcgcccggcatcagcgtttcgacgcagacgcagcggctgaaggatgtg
cgccgcggcgtcatggagctctatatctccgaccatccgctcgactgcctgacctgtgcc
gccaacggcgactgcgagctgcaggacatggccggcgccgtcggcttgcgtgacgtgcgc
tatggctatgatggcgcgaaccatgtgaaggcgcgcaacaatggcgagatcaatcgccaa
tgggcgccgaaggacgaatccaatccctatttcacctttgatccggcgaagtgcatcgtc
tgctcgcgctgcgtgcgtgcttgcgaagaggtgcagggcacctttgcgctgacgatcagc
ggccgcggcttcgattcgcgtgtttccgccggcatgagcgaggatttcgtctcctccgaa
tgcgtctcctgcggcgcctgcgtgcaggcctgcccgacggcgacgctgaccgaaaaatcg
gtgatcgagatcggccagccggagcattcggtcgtcaccacctgtgcctattgcggcgtc
ggctgctccttcaaggcggagatgcgcggcgaggagcttgtccgcatggtgccgtggaag
gatggccaggcgaaccgcggccattcctgcgtcaagggccgtttcgcctatggctattcg
aaccacaaggaccgcgttctcaacccgatggtccgcgacaaggtcaccgatccctggcgc
gaggtcacttgggaagaggcctttgcgcacgtcgcttccgagttccgccgaatccagtat
cagtatggccgagattccgtcggcggcatcacctcgtcgcgttgtaccaacgaggagacc
tatctggtgcagaagctggtgcgcgccggcttcggcaacaacaatgtcgatacctgcgcc
cgcgtctgccattcgccgaccggctacggcctcaaccagaccttcggcacctcggccggc
acgcagaatttcgacagcgtcgagcacacggatgtcgccatcatcatcggcgccaacccg
accgacggccatccggtcttcgcctcgcggctcaagaagcggctgcgcgagggcgccaag
ctgatcgtcatcgatccgcgccggatcgatctcgtccgctcggcccatgtcgaagcctcc
taccacctgccgatcaaacccggcaccaatgtcgccatcctgacggcgcttgcgcatgtc
atcgtcaccgagggcctcgccaacgaagccttcatccgcgagcgctgcgactggtcggaa
ttcgaggattgggcggcgttcgttgccgagccccaccacagcccggaagcgaccgaggct
tacaccggcgttccggccgaactggtgcgcggggctgctcgcctttacgccaccggcggc
aacggcgcgatctattacggcctcggggtcaccgagcacagccagggttcgaccacggtc
atggcgatcgccaacctcgccatggtcaccggcaacatcggtcggcccggcgtcggcgtc
aatccgctgcgcggccagaacaacgtgcagggctcctgcgacatgggctccttcccgcac
gagctgccgggctaccggcatatttcggacgacgcgacgcgcgagaccttcgagaagctg
tggggcgtgacgctcaacaacgagccgggccttcgtatccccaacatgctcgacgcagcg
gtcgaaggcaccttcaaggcgctctatatccagggcgaggacatcctgcagtccgacccg
gacaccaagcacgtggccgccggtctcgcggcgatggaatgtgtcgtggtgcacgacctg
ttcctcaacgagacggccaactatgcgcatgtcttcctgcccggctcgaccttcctggaa
aaggacggcaccttcaccaatgccgagcgccgcatcaatcgcgttcgccgggtgatgcgg
ccgaagaacggctatgccgactgggaggtgacgcagaaactcgcccaggccatgcgtctc
gactggaactatggccatccgtccgagatcatggatgaaatcgccgcgacgacgccgacc
ttcgccatggtctcctatgactatctcgacaagatgggctcggtgcagtggccctgcaac
gaaaaggcgccgctcggttcgccgatcatgcatgtcgacggcttcgtgcgcggcaagggc
aagttcatccgcaccgaatatgtgccgaccgacgagaggaccgggccgcgcttcccgctg
ctgctcaccaccggccgcatcctcagccactacaatgtcggcgcccagacgcgtcgtacg
gagaatgtcgtctggcacccggaagaccggctggagatccatccgcatgacgccgaacag
cgcggcatccgcgacggcgactggatccggctcgccagccgctcgggcgagacgacgctc
cgggcgctcatcacggaccgcgtcgcgcctggtgtcgtctacaccaccttccaccatccg
acgacgcaggcgaacgtcatcaccacggacttttccgactgggcgaccaactgcccggaa
tacaaggtgacggccgtgcaggtgtcgccgtcgaacggcccctcggactggcaggtcgac
tatgacgagcaggcccgccaatcgcggcggatcgccggcaagctggaggcggcggagtag
DBGET
integrated database retrieval system
