Sinorhizobium fredii USDA 257: USDA257_c56520
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Entry
USDA257_c56520 CDS
T02188
Name
(GenBank) ribose ABC transporter substrate binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd02010
ABC transporters
sfd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
USDA257_c56520
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
USDA257_c56520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c56520
Transporters [BR:
sfd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
USDA257_c56520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AFL54165
UniProt:
I3XE59
LinkDB
All DBs
Position
complement(5874356..5875384)
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AA seq
342 aa
AA seq
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MRTFFSTTAMAVLAATLFADSAAAETENPFRCKPGEKYVMNVMVSGVEYWFPVYEMFKQA
GQQFGCETEYTGTPEYDVNKQIATFDQALAQNPAGILVHPMNSDPFIEPINRAIDQGTAV
VTFAADSPLSKRVSFITSDNTREGIYAADAIAEKMGGKGEYAVLENPGQGNHDKRIAAFI
GRMEEQWPDMKLVGRAASNQDPTKAYQGLNSIIQANPNLGAVFMPEANSAIGAAQANKES
GGKVLVMCADVNANILDMIKAGEVFGSINPNQGMQGYMGFMLLWLAKHPELIDPMNDAKR
SGFNPMSIPVVDNGLSIVTAENADDFYWDKYLKRRGTKGIEE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcactttttttagcacgaccgcgatggcggtccttgcggcaacgctttttgccgat
tccgcagccgccgagacagagaacccgttccgctgcaaaccgggcgaaaaatacgtcatg
aacgtcatggtctcgggcgtcgaatactggtttccggtctatgaaatgttcaagcaggcg
ggccagcagttcggctgcgaaacggaatatacgggcacgccggaatatgacgtcaacaaa
cagatcgccaccttcgaccaggcactggcacagaacccggctggtattctcgtccatccg
atgaactccgaccccttcatcgagccgatcaaccgcgcgatcgaccagggcacggcggtc
gtgaccttcgcggccgactcgccgctctccaagcgcgtgtcgttcatcacctcggacaat
acccgcgaaggcatctatgccgccgacgcgatcgccgaaaagatgggcggcaagggcgag
tatgcggttctggaaaatccgggccagggcaaccacgacaagcgcatcgcggccttcatc
ggccgcatggaggagcagtggccggacatgaagctggtcggccgcgctgcctccaatcag
gatccgaccaaggcctatcagggcctcaacagcatcatccaggccaatccaaacctcggc
gccgtcttcatgccggaagcgaattcggcaatcggcgccgcccaggccaacaaggaaagc
ggcggcaaggtcctcgtcatgtgcgcggacgtcaacgccaatatcctcgacatgatcaag
gctggcgaggtcttcggttcaatcaacccgaaccagggcatgcagggctatatgggcttc
atgttgctgtggctcgccaagcatccggaattgatcgatccgatgaacgatgccaagcga
tccggcttcaacccgatgagcatcccggtcgtcgacaacggcctctccatcgtgacggcg
gaaaatgccgatgacttctattgggacaaatacctgaaacgtcgcggcacgaagggcatc
gaggagtaa
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