Sinorhizobium fredii USDA 257: USDA257_c57150
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Entry
USDA257_c57150 CDS
T02188
Symbol
hfaC
Name
(GenBank) holdfast attachment protein C
KO
K15738
ABC transport system ATP-binding/permease protein
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfd02000
]
USDA257_c57150 (hfaC)
Transporters [BR:
sfd02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
USDA257_c57150 (hfaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_CTD
AAA_21
SMC_N
AAA_22
AAA_29
AAA_30
AAA_16
MMR_HSR1
AAA_15
TsaE
AAA_23
AAA_5
NACHT
AAA
RsgA_GTPase
AAA_28
ORC-CDC6-like
AAA_14
DO-GTPase2
Zeta_toxin
AAA_18
AAA_33
MobB
cobW
MeaB
G-alpha
ABC_tran_Xtn
BON_like
Motif
Other DBs
NCBI-ProteinID:
AFL54226
UniProt:
I3XEC0
LinkDB
All DBs
Position
complement(5937088..5938911)
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AA seq
607 aa
AA seq
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MAPPILKLDDILLTFGGTPLLAGANLQVEPGDRICLVGRNGSGKSTLMKMAAGLIEPQSG
EIFRHPSVTIRYLHQAPDFDGFDTVQAYAEAGLGPGDDHYRVTYLLQHLGLTGEEDPKRL
SGGEARRAALARVMAPEPDILLLDEPTNHLDLPTIEWLEDELARSRSALVLISHDRRFLE
KVSTATVWLDRGQSRRLDRGFAHFEAWRDEVLEAEELEQHKLGKAIEREEHWLRYGVTAR
RKRNMRRLGELQDMRTRYRGHKGPQGTIQATVADAKESGKLVIEAEKITKAYGERTIVAP
FSIRVHRGDRIGLVGPNGAGKTTLLKLLTGQLEPDSGTVKLGTNLEIATLDQKREDLNLD
ETLAHYLTDGRGETLLVNGEQRHVTGYMKEFLFQPEQARTPISELSGGERARLILARILA
RATNLLILDEPTNDLDIETLDLLQEIVAGFAGTVILVSHDRDFLDRTVTSTIAPANPEAP
DGRWIEYAGGYSDMMAQRKGAIEERRKAEKAERAKPSDAPVETAEPKSKGKLSYKQKFAL
ENLPKEIAKAEAEIAKREEKMHDPSLFSRDPDGFAKLAAELEKLKEGLTRMEEEWLELEM
LREELEG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccccccatcctgaagcttgacgacatccttcttaccttcggcggcacgccgctt
ctcgccggcgccaatctgcaggtcgagccgggtgaccgcatctgcctcgtcggccgcaac
ggctcgggcaaatcgacgctgatgaagatggccgccggtcttatcgagccgcagtccggc
gagattttccggcatccctcggtaaccatccgctatctgcaccaggccccggacttcgac
ggcttcgacacggtgcaggcctatgccgaggccgggctcggccccggcgacgatcactac
cgcgtcacctatctgctgcagcatctggggctgaccggcgaggaggacccgaagcgcctc
tccggcggcgaggcgcgccgcgcggcactcgcccgcgtcatggcgccggagcccgatatc
ctgcttctcgacgagccgaccaaccatctcgacctgccgacgatcgaatggctggaagac
gagctcgcccgcagccgctcggccctcgtgctgatctcgcacgaccggcgttttctcgag
aaggtctcgaccgcgacggtctggctcgatcgcggccagtcgcgccggctcgaccgaggc
tttgctcatttcgaagcctggcgcgatgaggtgctggaggcggaggaactcgaacagcac
aagctcggcaaggcgatcgagcgcgaggagcactggctgcgctacggcgtcacggcgcgg
cgcaagcgcaacatgcgccgcctcggcgagttgcaggacatgcggacgcgctatcgcggc
cacaaggggccgcagggcacgatccaggcaaccgtcgccgacgccaaggaatccggcaag
ctggtcatcgaggcggagaagatcaccaaggcctatggcgagcggacgatcgtcgcgccc
ttctcgatccgcgtccatcgcggcgaccggatcggcctcgtcgggccaaacggcgccggc
aagacgacgctgctcaagctcctgaccgggcagctcgaaccggactcaggcaccgtcaag
ctcggcaccaatctggagatcgccacgctcgaccagaagcgtgaagatctgaacctcgac
gagacgctggcgcattacttgaccgacgggcgcggcgagacgcttctcgtcaacggcgaa
cagcgacacgtcaccggctacatgaaggaattcctcttccagccggagcaggcccgcacg
ccgatcagcgaactatccggcggcgagcgagcccggctgatcctcgcccgcatcctggcg
cgcgccaccaacctcctgatcctcgacgaaccgaccaacgacctcgacattgagacgctc
gacctcctgcaggagatcgtcgccggctttgccggaacggtgatccttgtcagccacgac
cgcgatttcctcgaccgcacggtgacctcgaccattgcgcccgccaatccggaagcgccc
gacggccgctggatcgaatatgccggcggttattccgacatgatggcgcagcgcaagggc
gcgatcgaggagcggcgcaaggccgagaaagccgagagggccaagccgagcgatgccccc
gtcgaaacagccgagccgaaatccaaggggaaactctcctacaagcagaaattcgcgctg
gagaacctgccgaaggagatcgccaaggccgaggccgagatcgccaagcgcgaagagaag
atgcacgatccttctctcttttcccgcgatccggacggtttcgcgaagcttgccgccgag
ctcgaaaaactgaaagagggcctgacgcgcatggaggaggaatggctggagcttgaaatg
ttgcgcgaggagctcgaaggctga
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integrated database retrieval system