Sinorhizobium fredii USDA 257: USDA257_c57300
Help
Entry
USDA257_c57300 CDS
T02188
Name
(GenBank) ATP-dependent DNA and RNA helicase protein
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfd03029
]
USDA257_c57300
Enzymes [BR:
sfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
USDA257_c57300
Mitochondrial biogenesis [BR:
sfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
USDA257_c57300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFL54241
LinkDB
All DBs
Position
complement(5950542..5953541)
Genome browser
AA seq
999 aa
AA seq
DB search
MSFQSMILSGRGVTAVLGPTNTGKTHYAIERMVAHDSGVIGLPLRLLAREVYTRLVEKVG
HHNVALITGEEKITPHRARYSVCTVEAMPRETTASFVAIDEVQLAGDLERGHIFTDRLLH
LRGRGETLLLGAATMRPILEYLLPGITVVERPRMSQLLYAGSKKITRLPHRSAIVAFSAD
EVYAIGELIRRQRGGAAVVLGALSPRTRNAQVALYQEGDVDYLVATDAIGMGLNLDVDHV
AFAQDRKFDGYQYRNLNPAELAQVAGRAGRHVRDGTFGVTGRVDPFEDELVHRIESHEFD
SVRVLQWRSKAVDYSSLKALKHSLEAAPAVSGLTRALPAVDQQALEHLARYPEVIDVATT
SERVEKLWEACALPDYRRITPAQHADLIASIYADLVRHGTVNEDFMAEQVRRADHTDGEI
DTLSARIAQIRTWTYVSNRPGWLADPTHWQEKTREIEDRLSDALHERLTKRFVDRRTSVL
MKRLRENAMLEAEISVNGDVFVEGHHVGQLTGFRFTLVAGSEGTDARAVQGAAQKALALE
FEARAARLHAAGNNDLALSSDGLVRWLGDPVARLAASDHVMRPRVILLADEQLQANARDH
VVARIERFVNHHISTVLKPLDDISRAEDLEGLAKGLAFQLVENLGVLFRRDVAEEVKSLD
QESRASIRKYGVRFGAYHIFLPALLKPAPAELITLLWALKNDGLDKPGHGELIPMLAAGR
TSVVTDPSFERTFYKLAGFRYLGKRAVRIDILERLADLIRPLLQWKPGMTPRPEGAYDGR
RFTATTSMLSILGATPDDMEEILKGLGYRADSVTAEEAAAFLAKQDGTPAEAGASSEAAA
EHVEADADAAAEPSEGGDAAPAENASAEAAPAEASGDETTAAEQPEEPAEPKPVLLWRPG
TRQDNQRGGRQQGDQRRGGQRQGQGEAREGGRKGGAPARAKPQDGKPGGQRKERQDRHER
HERHDRGAKFDNRPPRKEKPIDPDSPFAKLAALKEQLKK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttcaatccatgatcctgagcggccgcggggtgaccgcggtgctcggacccacc
aataccggcaagacgcattatgccatcgagcgcatggtcgcgcatgacagcggcgtcatc
gggctgccgctgagattgcttgcccgcgaggtctatacccgtctggtcgagaaggtcggg
caccacaatgtcgcgctgatcaccggcgaggagaagatcacgccgcatcgcgcccgctac
tcggtctgcacggtcgaggcgatgccgcgcgagacgacggcgtctttcgtcgcaatcgac
gaggtgcagctcgccggcgacctggaacgcggtcacatcttcaccgacaggctcttgcat
ctgcgcggccggggagaaacgctcctcctcggtgcggcgaccatgcggccgatcctcgag
tatttgctgccaggcatcacagtggtcgaacggccgcgcatgtcgcagcttctctatgcg
ggctcgaagaagatcacccggctgccgcatcgatcggcgatcgtcgccttctcggccgac
gaggtctatgccatcggcgagctgatccggcggcaacgcggcggcgccgcggtcgttctc
ggggcgctttcgccgcgcacccgcaacgcacaggtggcgctctaccaggaaggcgatgtc
gattacctggtggcgacagacgcgatcggcatggggctcaatctcgacgtcgatcatgtc
gccttcgcgcaggaccgcaagttcgacggttaccaataccgcaacctcaatccggcggag
cttgcccaggtcgccggccgcgccggccggcacgtccgcgacggcactttcggcgtgacc
ggtcgcgtcgatcccttcgaggacgagctggtgcaccggatcgaatcgcatgagttcgat
tcggtccgggtgctgcaatggcgctccaaggccgtcgactactcttcgctgaaggcgctg
aagcacagcctcgaggcggcaccggctgtgtccgggctgacgcgcgcccttccggccgtc
gaccagcaggcgcttgagcatttggcgcgctatccggaagtgatcgatgtcgccacgacc
tcggaacgcgtcgagaagctctgggaggcctgcgcgcttcccgactaccgccgcatcacg
ccggcgcagcacgccgacctgattgcgagcatctatgccgatctcgtccgccatggcacg
gtcaacgaggacttcatggccgagcaggttcgccgcgccgatcatacggatggcgagatt
gacacactttcggcgcgaatcgcgcagatcaggacttggacctatgtgtccaaccggccc
gggtggcttgccgatccgacacactggcaagaaaagacgcgggaaatcgaagatcgattg
tccgacgcgttacatgaaaggttgacgaaacgcttcgttgaccgcaggacatctgtgctc
atgaagcgcctgagagagaatgcgatgcttgaagcagaaatcagtgtgaatggtgatgtc
ttcgtcgaaggacaccacgtcggtcagctaaccggtttccggttcacgctcgtcgccggc
agcgagggaacggacgccagggccgttcagggcgccgcccagaaggcgcttgcgctggag
ttcgaggcacgcgccgcccgtctgcatgcggccggcaacaacgatctggcgctttcgtcg
gatgggctcgtgcgctggctcggcgatcccgtggcgcggcttgcggcgagcgatcacgtc
atgcgcccccgcgtcatcctgctcgccgacgagcagcttcaagccaacgcccgtgaccat
gtcgtggcgcggatcgagcgcttcgtgaaccatcacatcagcacggtgctgaagccgctc
gacgacatttcgcgtgccgaggatctcgagggcctggccaagggtctggcctttcagctc
gtcgagaatctcggcgtgctcttccgtcgcgatgtcgccgaagaggtgaagtcgctcgat
caggaaagccgtgcgtcgatccgcaaatatggcgttcgtttcggcgcctaccatatcttc
cttccggccctcttgaagccggcgccggcagagctgatcacgcttctctgggcgctgaag
aacgacggcctggacaagcccggccacggcgaactcattccgatgcttgccgccggccgg
acttcggtcgtgaccgatccgtccttcgagcggaccttctacaagctcgccggattccgc
tacctcggcaagcgcgccgtgcggatcgacatcctggaacgtctcgcggacctcatccgc
ccgctcctgcaatggaagccgggcatgacgccgcggcccgagggggcctatgacggccgt
cgcttcacggcgacgacgtcgatgctgtcgatcctcggtgcgacgccggacgatatggaa
gagatcctcaaaggtctcggctatcgcgccgacagcgtgaccgcggaggaggcggcagcc
ttcctggcgaagcaggacggcacgccggcagaggcgggcgcgtcgtcggaagctgctgcc
gagcacgttgaagccgacgcagatgcggcggcggagccttccgagggcggcgatgcggcg
ccggcggaaaacgcttcggcagaagccgccccggcagaagcgagcggcgacgaaacgact
gccgcggagcaaccggaagagccggccgagccgaagccggtgctcctgtggcgtcccggc
acccgccaggacaaccagcgcggcggccgccaacagggcgatcagcgccgcggcggccaa
cgtcagggccagggcgaggccagggaaggcggccgcaagggcggcgctccggcgcgcgcc
aagcctcaggacggcaagccgggcggtcagcgcaaggagcgccaggaccgtcatgagcgt
cacgaacgtcacgaccggggcgccaaattcgacaatcgcccgccgcgcaaggaaaagccc
atcgatccggattcgcccttcgcgaagctcgccgcgctcaaggagcaactgaaaaagtag
DBGET
integrated database retrieval system
