Sinorhizobium fredii USDA 257: USDA257_c57620
Help
Entry
USDA257_c57620 CDS
T02188
Name
(GenBank) putative methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sfd
Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfd03016
]
USDA257_c57620
Enzymes [BR:
sfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
USDA257_c57620
Transfer RNA biogenesis [BR:
sfd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
USDA257_c57620
Prokaryotic type
Methylthiotransferases
USDA257_c57620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
VWA_3
Lipase_GDSL_2
Usp
Rota_VP6
Motif
Other DBs
NCBI-ProteinID:
AFL54273
UniProt:
I3XEG7
LinkDB
All DBs
Position
complement(5982285..5983643)
Genome browser
AA seq
452 aa
AA seq
DB search
MGVVWHAGSLNRRLRARGHDQRKRSASALSGVEVITFGCRLNTYESEVMRAEAEKAGLNN
AILVNTCAVTAEAVRQARQAIRRVRRDNPHARIIVTGCAAQTEKETFADMAEVDAVLGNE
EKLASASYRSLPDFGVSAEEKLRVNDIMSVRATAPQMIKHIDGHVRAFIQVQNGCDHRCT
FCIIPYGRGNSRSVPMGAVVDQARRLTESGYREIVLTGVDATSYGADLPGTPMLGLLAKT
LLKQVPDILRLRLSSIDSIEADRHLLDLIADEPRFMPHLHLSLQHGDDLILKRMKRRHSS
GDARAFCDQVRSLRPEISFGADMIAGFPTETEEMFENAVRLAEDCGLAHLHVFPYSPRPG
TPAARMPQLDRALVKERAARLRAKGAALHAAHLDRMIGTEQTILVELNGLAHTENFTLVD
AAGLEPRSLLEVTISGHNGKHLAMQRKQMAAA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggagtggtctggcacgctggatccctcaaccggcgccttcgagcgcgaggtcacgac
cagcgaaagcggagcgcgagcgctttgagcggcgtcgaggtcatcaccttcggttgccgc
ctcaacacctatgaatcggaagtgatgcgggcggaggccgagaaggcggggctgaacaac
gccatcctcgtcaacacctgcgccgtcacggccgaagccgtgcgtcaggcacgccaggcg
atccgccgcgtgcggcgcgacaatccgcacgcccgcatcatcgtcaccggctgcgccgcc
cagaccgagaaggaaacttttgccgacatggcagaggtggacgcggttctcggcaacgag
gagaagctcgcgagcgcttcctatcgttcgctgccggacttcggcgtctcggccgaggag
aagttgcgcgtcaacgacatcatgagcgtgcgcgccacggcgccgcagatgatcaagcac
atcgacgggcacgtgcgcgccttcattcaggtgcagaacggctgcgaccatcgctgcacc
ttctgcatcatcccctatggccgcggcaattcccgctccgtgccgatgggcgcggtcgtc
gaccaggcgcggcggctcaccgaaagcggctatcgcgagatcgtcttgaccggtgtcgac
gcgaccagctacggcgccgacctgcctggaaccccgatgctcgggcttctcgccaaaacg
cttctgaagcaggtgccggacatcctgcggctgcgcctttcctcgatcgacagcatcgag
gcggaccggcatctcctcgacctgatcgccgacgagccgcgcttcatgccgcatttgcat
ctctcgctgcagcacggcgacgacctgatcctgaagcgcatgaagcggcgccattcgagc
ggcgacgcccgcgccttctgcgaccaggtgcgcagcttgcgacccgagatcagcttcggc
gccgacatgatcgccggctttccgacggaaacggaagagatgttcgaaaacgcggtgcgc
ctcgccgaggactgcggcctcgcccacctccacgtcttcccttatagcccgcgccccggc
acgccggcggcccgcatgccgcagctcgaccgggcgctcgtcaaggagcgggccgcgcgt
ctacgcgcgaaaggcgccgcgcttcacgccgcccatctcgaccgcatgatcggcaccgag
cagacgattctcgtcgagttgaacggattggcgcataccgagaactttacgctcgtcgat
gctgccggcctcgagccgcggtcgctgctggaggtcacgatctccggccacaatggcaag
catctggcgatgcaacgaaaacagatggctgcggcctga
DBGET
integrated database retrieval system
