KEGG   Sinorhizobium fredii USDA 257: USDA257_c59110
Entry
USDA257_c59110    CDS       T02188                                 
Symbol
alkB
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
sfd  Sinorhizobium fredii USDA 257
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfd03400]
    USDA257_c59110 (alkB)
Enzymes [BR:sfd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     USDA257_c59110 (alkB)
DNA repair and recombination proteins [BR:sfd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    USDA257_c59110 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: AFL54421
UniProt: I3XEW5
LinkDB
Position
6160331..6160942
AA seq 203 aa
MQVLPKGVRHIPGFLDRSRQEELVEAIRHVVATAPLYVPEMPKTGKPMSVRMTNCGSLGW
ITDRERGYRYQPEHPVTSKPWPPIPDVLIDIWWAVSASDKRPEACLVNFYSADARMGLHQ
DRDERDLETAVVSISLGDTCLFRVGGRTRGGRTMSFRLESGDVVVLGGEGRLAFHGVDRI
YPNTSTLLKNGGRVNLTLRRVNP
NT seq 612 nt   +upstreamnt  +downstreamnt
atgcaggtgctgccgaagggcgtaaggcatattcccggttttctcgaccgctcgcgtcag
gaagagcttgtcgaggccatccgccatgtggtcgccacggcgccgctctacgtgccggaa
atgccgaagaccggcaagccgatgtcggtgcgcatgaccaattgcggatcgctcggctgg
atcaccgatcgcgagcgcggctatcgctaccaaccggaacatccggtcaccagcaagccg
tggccgccgattcccgatgtcctcatcgacatctggtgggcggtttcggcaagcgacaag
cgacccgaggcgtgtctcgtcaatttctattccgccgacgcccggatgggattgcaccag
gaccgggacgagcgcgacctggaaacggccgtcgtgtcgatttcgctcggcgatacctgc
ctcttccgcgtcggcggccggacgcgcggcgggcggaccatgtcgttcaggctcgaaagc
ggcgatgtcgtcgtgctcggcggcgaggggcggctcgcctttcacggcgtcgaccggatt
tatccgaacacctcgacgctcttgaagaacggcgggcgggtcaatctgacgctacggagg
gtcaatccgtag

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