Sinorhizobium fredii USDA 257: USDA257_c59250
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Entry
USDA257_c59250 CDS
T02188
Symbol
glcB
Name
(GenBank) malate synthase G
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00620
Pyruvate metabolism
sfd00630
Glyoxylate and dicarboxylate metabolism
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
sfd01120
Microbial metabolism in diverse environments
sfd01200
Carbon metabolism
Module
sfd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
USDA257_c59250 (glcB)
00630 Glyoxylate and dicarboxylate metabolism
USDA257_c59250 (glcB)
Enzymes [BR:
sfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
USDA257_c59250 (glcB)
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MSG_insertion
MS_C
MS_N
DUF6986
Motif
Other DBs
NCBI-ProteinID:
AFL54435
UniProt:
I3XEX9
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All DBs
Position
6173587..6175758
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AA seq
723 aa
AA seq
DB search
MDRVENNDLKIDAGLHRFLVDEAMPGTGVDPDHFFSALAELVHDLAPKNRTLLAKRDELQ
AKLDAWYREHGAPVDLDAYQAFLREIGYLLPEGPDFSVSTANVDAEIATIAGPQLVVPVM
NARYALNAANARWGSLYDALYGTDAIPDADGAERGRSYNPARGAKVIAWARDFLDASVPL
ATGRWSEVAALAIDGPALSLSLTNGATMSLRNPAQFAGYSGSAATPSEIVLTQNNLHIVI
VLDATTPIGKADQAGISDVILESAITTIMDCEDSIAAVDAEDKVVVYRNWLGLMKGDLEE
EVAKGGRTFTRKLNADRVFTRSDGSALTLPGRSLMLVRNVGHLMTNPAILDRDGREVPEG
IMDAMVTALIALHDIGPSGRRANSRSGSMYVVKPKMHGPEEVAFACEIFARVEAALGLPA
NAIKMGIMDEERRTTVNLKECIRAARERVVFINTGFLDRTGDEIHTSMEAGPMIRKGDMK
QAAWIGAYENWNVDIGLECGLSGHAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPS
PTAATLHATHYHRINVAEVQADFKSRPRAKLADILSVPVAARPNWTEEEIQRELDNNAQG
ILGYVVRWVDQGVGCSKVLDINNVGLMEDRATLRISAQHMANWLHHGIVSEAQIVETMKR
MAAVVDQQNAGDPHYAPMAGHFDESIAFRAALELVLNGREQPNGYTEPVLHRRRLELKAK
LTA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgttgagaacaatgatctgaagatcgatgcgggccttcaccgcttcctggtc
gacgaggcgatgccgggcaccggcgtcgatcccgaccatttcttttccgccctcgcggaa
ctcgtccatgatctcgcgccgaagaaccgaacgcttctcgccaagcgcgacgaactccag
gcaaagctcgatgcctggtaccgcgaacatggtgctccggtcgacctcgatgcctatcag
gctttcctgagagagatcggctatctcctgccggaggggccggatttctcggtgtcgacc
gccaatgtcgatgccgaaatcgccaccattgcggggccgcaactcgtcgttccggtgatg
aatgcccgctatgcgctgaacgccgccaatgcgcgctggggttcgctctatgacgcgctc
tacgggaccgacgctattcccgatgcggacggggccgagcgcggcagaagctataatccg
gcgcgcggtgccaaggtcattgcctgggcacgggattttctcgacgcgagcgttccgctt
gccacgggccgctggagcgaggtcgctgcgcttgcgatcgacgggcctgctctttcgctg
agcttgacgaacggcgccacgatgtcgcttcggaatccggctcagttcgccggctattcc
gggtccgcggcgacgccttccgagatcgtcctcacccagaacaatcttcacatcgtcatc
gtcctcgatgcaacgacgccgatcggcaaggctgaccaggccggcatttccgacgtcatc
ctcgaatcggcgatcacgacgatcatggactgcgaggactccattgccgcggtcgatgcc
gaggacaaggtcgttgtctatcgaaactggctcgggctgatgaaaggcgacctcgaggaa
gaggtcgccaagggcggcaggacgttcacgcgcaagctcaatgctgaccgcgttttcacc
aggtccgatggttcggcgctgacgttgcccggtcgttcgctgatgctggtgcgcaatgtc
gggcatttgatgaccaatccggcgatcctcgaccgtgacggccgcgaggtgcccgaaggc
atcatggacgccatggtgacggcgctgatcgctctgcacgatatcggcccgagcggaagg
cgggcaaactcgcgcagcggctcgatgtatgtagtcaagccgaagatgcacggcccggag
gaagtggccttcgcctgcgagattttcgctcgcgtcgaggcggcgctcgggcttccggcc
aatgccatcaagatgggcatcatggacgaggaacggcgcaccaccgtcaatctcaaggaa
tgcatccgcgccgcccgcgagcgggtcgtcttcatcaataccggcttcctcgaccgtacc
ggcgacgagatccatacctcgatggaagccggcccgatgatccgcaagggcgacatgaag
caggcggcctggatcggtgcctacgaaaattggaatgtcgatatcggcctcgagtgcggc
ctttccggccacgcccagatcggcaagggcatgtgggcgatgccggacctgatggccgcc
atgctggagcagaagatcgcccatccgaaggccggcgccaatactgcctgggttccctcg
ccaacggcggcgacgttgcacgccacgcattatcaccggatcaacgttgccgaggtacag
gcggacttcaagagccggccgcgtgccaagctcgccgatattctctcggtaccggtggcg
gcgcggccgaactggacagaagaggagatccagcgcgaactcgacaacaacgcccagggc
attctcggctatgtcgtgcgctgggtcgaccagggcgtcggctgctcgaaggtgctcgac
atcaacaatgtcggtctgatggaagaccgcgcgacgctgcgcatctcggcgcagcacatg
gccaactggctgcaccatggcatcgtcagcgaggcgcagatcgtcgagacgatgaagcgg
atggcggccgtcgtcgaccagcagaatgcaggcgatccgcactatgcgcccatggccggc
catttcgacgaatcgatcgccttccgggcagcgctcgaactggtgctcaatggccgcgag
cagccgaacggctataccgaaccagtgctgcaccgccgccgcctggagctcaaggcgaaa
ctgaccgcttga
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