Sinorhizobium fredii USDA 257: USDA257_c59570
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Entry
USDA257_c59570 CDS
T02188
Symbol
deoA
Name
(GenBank) thymidine phosphorylase DeoA
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00240
Pyrimidine metabolism
sfd01100
Metabolic pathways
sfd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
USDA257_c59570 (deoA)
Enzymes [BR:
sfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
USDA257_c59570 (deoA)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
AFL54461
UniProt:
I3XF05
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Position
6213780..6215096
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AA seq
438 aa
AA seq
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MPMLPQEVIRKKRDGAQLERAEIGDFITGVADGSISEGQVAAFAMAVWFSGMNRHECVAL
TLAMRDSGETLDWSALGRPVVDKHSTGGVGDNVSLMLAPIVAACGPIVPMISGRGLGHTG
GTLDKLESIPGYDIQPSPALFHRVVDEVGCAIIGQTANLAPADKRLYAIRDVTATVDSVP
LITASILSKKLAAGLQSLVLDVKLGNGSLLTDPGETEILAQSLVDVANGAGVRTSALITD
MNEPLADASGNALEIENCLAFLRGEKAGTRLDRVVMAFAAEMLVAAGVATDEMEAEALAR
NALASGAAMERFGRMVHLLGGPADFVDRSDTYLKKAPVAVAVPAHRDGYLAACETRELGM
AVIALGGGRTHPDESIDHRVGLSHLRPLGTKLDKGEPIAFVHAADRQQAEAVRDRVAKLY
VIADERPASRPVVLSKIT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgcttccccaggaggtgatccggaagaagagggatggcgcccagctggaacga
gcggagataggcgacttcatcacgggcgtcgcggacggctcgatctccgagggtcaggtc
gccgccttcgccatggccgtctggttttccggcatgaaccgccacgaatgcgtggcgctg
acgctggcgatgcgcgattccggcgaaacactcgattggagcgcgctcgggcggccggtc
gtcgacaagcattcgaccggtggggttggcgacaacgtctcattaatgctggcgccgatc
gttgccgcctgcggccccattgttccgatgatctccggccgcggcctcggccacaccggc
ggcacgctcgacaagctcgaatccattccgggctatgatatccagccatctccggcgctg
tttcatagggtggtcgacgaagtcggctgcgccatcatcggccagaccgccaatctggcg
ccggccgacaagcggctctatgcgatccgcgatgtgacggcgacggtcgattcggtgccg
ttgatcaccgcctcgatcctttcgaagaagctcgccgccggcctccagtcgctggtgctg
gacgtgaagctcggcaacggttccttactgactgatcccggcgaaaccgaaattttggcg
caatcgctcgtcgatgtcgccaatggggcgggtgtgcggacttcggcgctgatcaccgac
atgaacgagccgctagcggatgcctccggcaatgcgctcgagatcgagaactgtctcgct
tttctgcgcggcgagaaggcggggacgcggcttgatcgtgtggtgatggccttcgcggcc
gaaatgctcgtcgccgcgggcgtggcgacggacgagatggaggccgaggcgctggcgcgg
aacgctcttgcaagcggggctgcgatggaacgcttcggccgcatggtgcatctgcttggt
ggcccggcggacttcgtcgaccggtcggatacctatctcaagaaggcgccggtcgcagtc
gccgtgcccgctcatcgcgatggctatctggccgcctgcgagacccgcgaactgggcatg
gcggtcattgcgctcggcggcgggcgtacccacccggacgagagtatcgaccaccgggtc
ggcctttcccatttgaggccactcggaacgaagctcgataagggcgaaccgatcgccttc
gttcatgcggccgaccggcaacaggccgaagcagtgagagacagggttgcgaagctctat
gtgatcgccgacgaacggccagcatcgcgccccgtggtcctgtcgaaaattacctga
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