Shigella flexneri 2002017 (serotype Fxv): SFxv_0186
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Entry
SFxv_0186 CDS
T01883
Symbol
ldcC
Name
(GenBank) Lysine decarboxylase 2
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00310
Lysine degradation
sfe01100
Metabolic pathways
sfe01110
Biosynthesis of secondary metabolites
sfe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SFxv_0186 (ldcC)
Enzymes [BR:
sfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SFxv_0186 (ldcC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ADA72525
LinkDB
All DBs
Position
200109..202250
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY
TNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGISTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVFF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVKTAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECRPVAPGEQWHGFNDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLSGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaaatttatcgaacataaccctcgaatttgcggcgtgatttttgactgggat
gagtacagtctcgatttatgcagcgatatcaatcaacttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tggttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accaacgaatatcttgataacattacgccgccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccggggcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgattttttcggcgggaatacccttaaggctgatgtc
tctatttcggtcaccgagcttggttcgttgcttgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggacttttggcgcggaacagagttatatcgttaccaacggaata
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatc
gaccgcaactgccataaatcactggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattctgggggggatcccgcgccgtgaattt
actcgcgacagcatcgaagagaaagtcgctgccactacgcaagcacaatggccggttcat
gcggtgatcaccaactccacctatgatggtttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgatccacttcgattccgcctgggtgccgtatactcattttcat
ccaatctaccagggtaaaagtggtatgagcggcgagcgtgttgcgggaaaagttttcttc
gaaacgcaatcgacccacaaaatgctggcggcgttatcgcaggcttcactgatccacatt
aaaggcgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttcggttaagacggcggcggcgatgctgcgtggtaatccg
ggcaaacggctgattaaccgttcggtggagcgggcgctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggttggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgcaggcccgttgcgcctggcgaacaatggcacggctttaacgatgcggat
gccgatcatatgtttctcgatccggttaaagtcactattttgacaccggggatggacgaa
cagggcaatatgagtgaggaggggatcccggcggcgctggtagcaaaattcctcgacgaa
cgtgggatcgtagtagagaaaaccggcccttataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaagcgctcttac
gatctcaacctgcggatcaaaaatatgctgcccgatctctatgctgaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatctttccggtttgatgttgcgggcattcgatactttgccggaaatgatcatgacgcca
catcaggcatggcagagacagattaaaggtgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccaccgggcgtaccgctgttgatg
ccaggagaaatgctgaccaaagagagccgcacggtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggcgcgaaacaggacgaa
gacggcgtttaccgcgtacgagtcctaaaaatggcgggataa
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