KEGG   Shigella flexneri 2002017 (serotype Fxv): SFxv_0391
Entry
SFxv_0391         CDS       T01883                                 
Symbol
ribD
Name
(GenBank) putative Pyrimidine reductase, riboflavin biosynthesis
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sfe  Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00740  Riboflavin metabolism
sfe01100  Metabolic pathways
sfe01110  Biosynthesis of secondary metabolites
sfe01240  Biosynthesis of cofactors
sfe02024  Quorum sensing
Module
sfe_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sfe00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SFxv_0391 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SFxv_0391 (ribD)
Enzymes [BR:sfe01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SFxv_0391 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SFxv_0391 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ADA72730
LinkDB
Position
380817..381920
AA seq 367 aa
MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAG
EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGI
DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV
QRQRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTP
EHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEA
GPTLAGVLLQAGLVDELIVYIAPKLLGSDARGLCSLPGLEKLADAPQFKFKEIRHVGPDV
CLHLVGA
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgcaggacgagtattacatggcgcgggcgctaaagctggcgcaacgaggacgttttacc
acccaccccaacccgaatgtcgggtgcgtcattgtcaaagatggcgaaattgtcggtgaa
ggttaccaccaacgagcgggtgaaccacatgccgaagtacacgcgttgcgtatggcgggt
gaaaaagccaaaggcgcaacggcgtatgtgacactcgaaccctgtagccatcatggccgt
acgccaccgtgctgtgacgcactcatcgccgctggcgtagcgcgcgtggtcgcagcgatg
caagatcctaacccgcaggtcgctgggcgtggactttaccgtctgcaacaggctggcatt
gacgtcagccacgggctgatgatgagtgaagccgagcaattgaataaaggctttctcaag
cggatgcgcaccggctttccttatattcagttaaaacttggcgcatcgcttgatggccgc
acggcgatggcgagcggcgaaagccagtggatcacttcgcctcaggcgcggcgcgacgta
caacgacagcgcgcacaaagtcatgccattttaaccagcagcgccacggtgctggcggat
gatccagccttaacagtgcgttggtctgaactggatgaacaaactcaggcgctctacccg
caacaaaatctccgccagccagtacgtattgtgattgatagccaaaatcgcgtgacgccg
gaacatcgcattgtgcagcagcccggcgaaacctggttcgcgcgtacgcaggaagattct
cgtgagtggccggaaacggtgcgtaccttgctgattccagagcataaaggtcatctggat
ctggttgtactgatgatgcaactgggtaaacagcagattaacagcatctgggtggaagcg
gggccaacgctcgctggcgtattgctacaggcgggtttagtcgatgagctgattgtctat
atcgcacctaaactattaggcagcgacgcccgtggattatgctcgctgccagggcttgag
aaattagccgacgccccccaatttaaattcaaagagatacgtcatgtaggcccggatgtt
tgcctgcatttagtgggtgcatga

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