Shigella flexneri 2002017 (serotype Fxv): SFxv_0827
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Entry
SFxv_0827 CDS
T01883
Symbol
ybiO
Name
(GenBank) Transporter, small conductance mechanosensitive ion channel (MscS) family
KO
K22044
moderate conductance mechanosensitive channel
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfe02000
]
SFxv_0827 (ybiO)
Transporters [BR:
sfe02000
]
Other transporters
Pores ion channels [TC:
1
]
SFxv_0827 (ybiO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ADA73117
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All DBs
Position
complement(800280..802343)
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AA seq
687 aa
AA seq
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MLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARF
GQLYRNITGSPHKPFNPQTFSNALSHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKN
RERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIE
FFKAVLRLIFCPNVAELRPFTIQDESARYWGRRLSWLSSLIGYGLIVAVPIISNQVNVQI
GALANVIIMLCMTVWALYLIFRNKKEITQHMLNFAEHSLAFFSLFIRAFALVWHWLASAY
FIMLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPE
LQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALIL
FFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIG
VNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSI
RSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVTELM
ENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVR
APVQTYQVLPAPGATPAEPLPPGEPTL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgctggataacgacacctcgcgtaaagagttgatcgaccagttgcgtactgtcgccgcg
acgccccctgcggaaccggtcccgaagatcgtgccgccgacgctggttgaagagcaaacc
gtgctgcaaaaggtcaccgaagtcagccgccattatggtgaagccctttccgcccgcttc
gggcaactttatcgcaatatcaccggctccccgcataagccatttaatccacaaaccttc
agcaatgcgctgagccatttttcaatgttagcggtattagtgtttggtttttactggctg
attcgcctgtgcgcactgccgctatatcgcaaaatgggtcagtgggcgaggcaaaaaaat
cgtgagcgcagcaactggttgcagcttccggcgatgattattggggcgtttattatcgac
ctgctgttactggccctgacattatttgtcggccaggtattaagcgacaacctgaatgca
ggcagtcgcaccatcgctttccaacaaagtttgtttctcaacgcctttgccctgattgaa
tttttcaaagccgtactacgcctgattttttgcccaaacgtggcggagctgcgcccgttc
acgattcaggacgagagcgcccgttactggggtcgtcgcctgagctggttaagcagcctg
attggctatggcctgattgtggccgtgccgattatctctaatcaggtgaatgtacagata
ggtgcgctggcgaacgtcatcattatgctgtgcatgaccgtctgggcgttgtacctgatc
ttccgaaataaaaaagagattacccagcatatgctcaactttgcggagcattcgctggct
tttttcagcctgtttatccgcgcctttgcgctggtgtggcactggctggcaagcgcctat
tttatcatgctgtttttcttttcgttgttcgatccgggcaacagtctgaaatttatgatg
ggtgcaacggtgcgcagcctggcgattattggtatcgcagcgtttgtttccggtatgttt
tcccgctggctggcgaaaaccatcaccctctcgccacatactcagcgtaactatccggag
ctacaaaaacggctgaatggctggctttcggcggcgctgaaaacggcgcgtattctgacc
gtctgcgtggcagtaatgttgctgttgagcgcatggggattgttcgatttctggaactgg
ctgcaaaacggcgcggggcagaaaaccgtagatatcctgatccgcatcgcactcattctt
ttcttctcggcggttggctggacggtgctcgccagtttgatcgaaaaccggctggcttcg
gatattcatggccgcccgctacccagcgcccgtacgcgtaccctgctgacgctgttccgt
aacgcgctggcggtgattatcagtaccatcaccatcatgattgtgttgtcggaaatcggc
gtcaatatcgcgccattgctggcaggtgccggggcattaggtctggctatctcgtttggt
tcgcaaacgctggtaaaagatattatcaccggggtatttattcagtttgaaaacggcatg
aacactggagatttggtgactatcgggccgttgaccggcacagtggaacggatgtcgatt
cgctccgtgggcgtgcgccaggataccggggcgtatcacatcattccgtggtcttcgata
accacctttgctaacttcgtccgcggtattggttcggtagtggcaaactacgatgttgat
cgccatgaagatgctgataaagccaatcaggcactgaaagatgcggtaacggaattgatg
gaaaacgaagaaattcgcgggctgattattggtgaaccgaactttgccgggattgtcggc
ttaagcaataccgcgtttacactgcgtgtttcgttcaccacgctgccactcaaacagtgg
acggtacgctttgccctcgacagccaggtgaaaaaacatttcgacctggcgggcgttcgc
gcgccagtgcagacttatcaggtgctgcctgctccgggcgcgaccccggctgaaccgctg
ccgccgggggagccaacgctttaa
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