KEGG   Shigella flexneri 2002017 (serotype Fxv): SFxv_1046
Entry
SFxv_1046         CDS       T01883                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sfe  Shigella flexneri 2002017 (serotype Fxv)
Brite
KEGG Orthology (KO) [BR:sfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfe03400]
    SFxv_1046 (helD)
Enzymes [BR:sfe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SFxv_1046 (helD)
DNA repair and recombination proteins [BR:sfe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SFxv_1046 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 DEAD
Other DBs
NCBI-ProteinID: ADA73311
LinkDB
Position
1021972..1024095
AA seq 707 aa
MGWSTFSLTVTLIRNNFVWIYRVMELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYL
IPFNQLLAIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSE
IASGVLRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWR
KCQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAG
AGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHA
LALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSV
PEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLK
AWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQN
SQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIGEVANRFIQ
QNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASL
EKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSGGFPAAARESIMEEALLPPVEDF
PDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARKP
NT seq 2124 nt   +upstreamnt  +downstreamnt
ttgggctggagcacgttttctctgacggttacactgataagaaataatttcgtgtggatc
tacagagtcatggaactgaaagcgacaacgcttggaaaacgtctggcacagcacccttac
gatcgggcggtgatcctcaatgccgggattaaagtctccggcgatcgccacgaatacctt
attcctttcaatcaattactggcgattcactgtaagcgcggtctggtatggggcgagctg
gaatttgtactgccggacgaaaaagtggtgcgtctgcacggcacagaatggggcgagacg
cagcgtttttaccatcatcttgatgctcactggcggcggtggagtggcgagatgagcgaa
attgcgtctggtgttttacgccagcaactggatttgattgccacgcgcactggagaaaat
aaatggctgacgcgtgagcaaacctctggcgttcagcaacaaatccgccaggctttgtcg
gcgttgccgttgccggttaaccgactggaagaattcgataactgccgtgaggcgtggcgt
aaatgtcaggcttggttgaaagatattgaaagcgctcggttgcagcataaccaggcgtat
accgaagccatgcttaccgagtatgcggattttttccgccaggtcgagtcttcaccgctg
aatccggcgcaggcccgggcagtcgttaatggcgagcattctctgttagtgctggctggt
gcaggaagcggaaaaacgtcggtgctggtggcccgtgcaggctggttgctggcgcgtggt
gaagcgtcccctgagcaaattttattgctggcgtttggtcgcaaagccgctgaagagatg
gacgagcggattcgcgaacggctacataccgaagacattaccgcacgcacgtttcatgcg
ttggcgctgcatattattcagcagggcagcaaaaaagttccgatagtcagcaaactggaa
aatgataccgctgcccgtcatgaactctttattgctgagtggcgcaagcaatgcagcgaa
aagaaagcgcaggcgaagggctggcggcaatggctgacggaagaaatgcagtggtcagtg
ccagaaggtaacttctgggatgatgaaaaattacagcgtcgccttgcctctcgcctcgat
cgctgggtaagtctgatgcggatgcacggtggtgcacaggcagaaatgattgccagtgca
cccgaagagattcgcgatctgttcagtaaacgtatcaagttgatggccccgttattaaaa
gcctggaaaggtgcgctgaaggcagaaaacgctgtcgatttttcgggccttattcatcag
gcgattgtgattctggagaaaggccgctttatcagcccgtggaagcatattctggttgat
gaatttcaggatatctcgccgcagcgcgcagcgttgttagcggcattacgcaagcaaaac
agtcagacgacgttgttcgccgttggtgatgactggcaggcgatttaccgattcagcggt
gcgcaaatgtcgctcaccaccgctttccatgaaaactttggtgaaggcgatcgctgtgat
ttagacacgacttaccgttttaacagtcgtatcggtgaggtggcaaaccggtttattcag
cagaacccaggccagctgaaaaagccgctaaacagcttaaccaatggagacaaaaaagcc
gtcacgttattggatgagagtcaacttgacgctttgctggataagctctctggttatgcc
aaaccggaagagcgcattctgatcctggcgcgttaccatcacatgaggcctgccagcctg
gaaaaagcggcaacacgctggccgaagttgcaaatcgactttatgaccattcatgccagc
aaagggcaacaggcggattacgtcatcatcgttggcttgcaggaggggagtggtggtttt
ccggctgcggcgcgggagtcgattatggaagaggcgctactgccaccggttgaggatttc
ccggacgctgaagaacggcgtttaatgtacgtggcgctgacccgggcacgccatcgggta
tgggcactgtttaacaaagagaatccctctccctttgtggaaatactgaaaaatctggat
gtgccggtggcgagaaaaccgtaa

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