Shigella flexneri 2002017 (serotype Fxv): SFxv_1270
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Entry
SFxv_1270 CDS
T01883
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SFxv_1270
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfe01002
]
SFxv_1270
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfe01011
]
SFxv_1270
Peptidases and inhibitors [BR:
sfe01002
]
Cysteine peptidases
Family C82
SFxv_1270
Peptidoglycan biosynthesis and degradation proteins [BR:
sfe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SFxv_1270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ADA73513
LinkDB
All DBs
Position
complement(1214506..1215471)
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AA seq
321 aa
AA seq
DB search
MVMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPASSRLVGENKFHVVENDGGSLEAI
AKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPG
KNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAG
PDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVN
IINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHV
MDVRSGMPVDVRRHQVSPQTL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgcc
gtggcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgagcagtcgt
ctggttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatc
gccaaaaaatataacgtcggctttctcgctctgttacaagctaaccccggcgttgatcct
tacgtaccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcg
ccgcgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggt
aaaaattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgaca
ccgacaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggca
aacatccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctgga
ccggataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttg
cttcacggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgt
ctgcgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaat
atcatcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagta
catcagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaat
agcgcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtg
atggatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaact
ctgtaa
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