Shigella flexneri 2002017 (serotype Fxv): SFxv_1778
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Entry
SFxv_1778 CDS
T01883
Symbol
lsrA
Name
(GenBank) putative ATP-binding component of a transport system
KO
K10558
AI-2 transport system ATP-binding protein
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe02010
ABC transporters
sfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFxv_1778 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFxv_1778 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfe02000
]
SFxv_1778 (lsrA)
Transporters [BR:
sfe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
SFxv_1778 (lsrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_23
AAA_30
MukB
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ADA73983
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Position
1669156..1670691
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AA seq
511 aa
AA seq
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MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGI
TPADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQK
MKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLF
SRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPAV
REKSLSASQKLWLELPGNRPQHAVGTPVLTLENLTGEGFRNVSLTLNAGEILGLAGLVGA
GRTELAETLYGLRTLRGGRIMLNGKEINKLSTGERLLRGLVYLPEDRQSSGLNLDASLAW
NVCALTHNLRGFWAKTAKDNATLERYRRALNIKFNQPEQAARTLSGSNQQKILIAKCLEA
SPQALIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLFISSDMEEIELMADRVYVMHQGE
ITHSALTGRDINVETIMRVAFGDSQRQEASC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgagtgatacccgcgcgttaccgctactttgcgcccgctcggtttataaacag
tattcaggggtcaatgtcctgaaaggcatcgattttacgttgcatcagggggaggtccac
gccctgctcggcggcaatggtgccggtaaatcgacgttaatgaagattattgccggtatt
acccctgctgatagcggtacgctggagattgggggcaacaactacgccagattaacgcca
gttcatgctcatcagctgggcatttatctcgttccccaggaaccgctgcttttcccaagc
ctgtcgataaaagaaaacatcctgtttgggctggcaaaaaaacagctctccatgcagaaa
atgaagaacttgctggcggcgctgggctgccagtttgatctgcatagtctggcaggatcg
ctggatgtcgccgatcgccaaatggtggaaatcctccgcgggctgatgcgcgactcgcgg
attctgatcctcgatgaacctaccgcctcgcttacccctgcggaaaccgaacgcttgttt
agtcgcttgcaagagctgcttgctactggcgtgggtattgtttttatctcgcataagctg
ccggaaattcgccagattgccgatcgaattagcgtgatgcgcgacggaaccatcgcctta
agcggcaaaaccagcgaactgtctaccgacgacattattcaggccatcaccccagcggta
cgggaaaaatcgctctctgccagccaaaaattatggctggagttacctggtaaccgccca
caacatgccgtcggaacgccggtgctgacactggaaaatctgactggcgaaggcttcagg
aatgtcagcctgacgctcaatgccggagaaattctgggcctggctgggctggtgggagcc
ggacgcacagaactggccgagacgctctatggtctgcgtactttgcgtggcggacgcatt
atgctgaatggtaaagagatcaataaattatccactggagaacgtttactgcgcggtctg
gtttatctgccggaagatcgccagtcatccggactgaatctcgatgcttcgctggcctgg
aacgtctgcgcccttactcataaccttcgtggattctgggcgaaaaccgcgaaagataat
gccaccctggaacgttatcgtcgggcgctgaatattaaatttaaccaaccggaacaagct
gcacggacattatccggtagcaaccagcaaaaaatcctcattgccaaatgcctggaagct
tcgccgcaagcattgattgtcgatgagccgacgcgcggcgtggatgtctcggcccgtaat
gatatctaccagctgttgcgcagcatcgccgcacagaatgtggctgtgctgtttatctcc
tctgatatggaagagatcgaactgatggcagatcgtgtgtatgtgatgcatcagggcgaa
attacccactctgcactgaccgggcgcgatattaatgtcgagactattatgcgcgttgcc
ttcggcgatagtcagcgtcaggaggcatcatgctga
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