Shigella flexneri 2002017 (serotype Fxv): SFxv_2335
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Entry
SFxv_2335 CDS
T01883
Name
(GenBank) dTDP-rhamnosyl transferase rfbF
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFxv_2335
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfe01005
]
SFxv_2335
Lipopolysaccharide biosynthesis proteins [BR:
sfe01005
]
O-antigen repeat unit
SFxv_2335
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_trans_2_3
Motif
Other DBs
NCBI-ProteinID:
ADA74473
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Position
complement(2167327..2168217)
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AA seq
296 aa
AA seq
DB search
MNSNIYAVIVTYNPELKNLNALITELKEQNCYVVVVDNRTNFTLKDKLADIEKVHLICLG
RNEGIAKAQNIGIRYSLEKGAEKIIFFDQDSRIRNEFIKKLSCYMDNENAKIAGPVFIDR
DKSHYYPICNIKKNGLREKIHVTEGQTPFKSSVTISSGTMVSKEVFEIVGMMDEELFIDY
VDTEWCLRCLNYGILVHIIPDIEMVHAIGDKSVKICGINIPIHSPVRRYYRVRNAFLLLR
KNHVPLLLSIREVVFSLIHTTLIIATQKNKIEYMKKHILATLDGIRGITGGGRYNA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaatatttacgctgtcattgtgacatataatcccgaacttaaaaatctgaat
gcactgatcactgaactaaaggagcaaaattgttacgttgtagtagtcgataataggact
aatttcaccttgaaagataaattagcagacattgaaaaagttcatttaatttgtcttggt
aggaatgaaggtatagcaaaagcacaaaatattgggattcgatattctcttgaaaaaggg
gcagagaagataattttttttgatcaagatagccgtattcgcaatgagtttatcaaaaaa
ctttcctgctatatggataatgaaaatgcaaaaatagctggcccagtttttattgataga
gataagtcacattattatcctatttgtaatatcaaaaaaaatggtcttcgagagaaaatt
catgtcactgaaggacagacaccgtttaaaagttcagtaacaatctcatccggaaccatg
gtttcaaaagaagtttttgagattgttggaatgatggatgaggaactttttattgattat
gtcgatacagaatggtgtcttagatgcttaaactatggcatattagttcatatcattcct
gatatagaaatggttcatgctattggggataagtcagtaaaaatctgtgggattaacata
ccaattcactcgccagtacgtcgttattatcgagtaagaaatgcatttcttttgcttaga
aaaaatcatgtgcctcttttactctctattagggaagttgttttttctttaattcatacg
actttaattatcgcaactcaaaaaaataaaattgaatatatgaaaaaacatattttggct
acgctggatggaataagaggaattactgggggcggtcgttataatgcatag
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