Shigella flexneri 2002017 (serotype Fxv): SFxv_2340
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Entry
SFxv_2340 CDS
T01883
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00521
Streptomycin biosynthesis
sfe00523
Polyketide sugar unit biosynthesis
sfe00525
Acarbose and validamycin biosynthesis
sfe00541
Biosynthesis of various nucleotide sugars
sfe01100
Metabolic pathways
sfe01110
Biosynthesis of secondary metabolites
sfe01250
Biosynthesis of nucleotide sugars
Module
sfe_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
sfe_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SFxv_2340 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFxv_2340 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SFxv_2340 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFxv_2340 (rfbB)
00525 Acarbose and validamycin biosynthesis
SFxv_2340 (rfbB)
Enzymes [BR:
sfe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SFxv_2340 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
ADA74478
LinkDB
All DBs
Position
complement(2171905..2172990)
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AA seq
361 aa
AA seq
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MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC
DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND
EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA
WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHA
RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH
DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSGTYQSWIEQNYEGR
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatacttgttactggtggcgcagggtttattggttctgctgttgttcgtcacata
ataaataatacgcaagatagtgttgttaatgtcgataaattaacatacgccgggaacctg
gaatcactcgctgatgtttctgattctgaacgttatgcttttgagcatgcagatatctgc
gatgctgtagccatgtcgcgtattttcgcacagcaccagccagacgcggtgatgcacctg
gcggcagagagccacgttgaccgttcaataacgggccctgcggcatttattgaaaccaat
attgtggggacttatgttcttttagaagcggcgcgcaattactggtctgctctgaatgat
gaaaagaaaaaaagtttccgctttcatcatatttctactgatgaagtttatggtgactta
ccccatccggatgaagcaaataataacgaagcgttaccgctatttacggaaacgacagct
tacgcgccaagtagcccgtattctgcgtctaaagcttccagcgatcatttggtacgtgcc
tggaagcggacttatggtttaccaaccattgtgactaattgctcgaacaattatggtcct
tatcacttcccggaaaaacttattccattggttattctgaatgctctggaaggtaaggca
ttacctatttatggtaaaggggatcaaattcgcgactggttgtatgtagaggatcatgct
cgtgcgttatataccgtcgtaaccgaaggtaaagcgggtgaaacttataacattggtgga
cataacgaaaagaaaaacatcgacgtagtgctcactatttgtgatttgttggatgagatt
gtaccgaaagagaaatcttatcgtgagcaaattacttatgttgccgatcgcccggggcat
gaccgccgttacgccattgatgccgataaaattagccgcgaattgggctggaaaccgcaa
gaaacgtttgagagcgggattcgtaaaacggtggaatggtatctggctaatacaaattgg
gttgagaatgtgaaaagcggtacttatcagtcgtggattgaacaaaactatgagggccgt
cagtaa
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