Shigella flexneri 2002017 (serotype Fxv): SFxv_2587
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Entry
SFxv_2587 CDS
T01883
Symbol
menD
Name
(GenBank) 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00130
Ubiquinone and other terpenoid-quinone biosynthesis
sfe01100
Metabolic pathways
sfe01110
Biosynthesis of secondary metabolites
sfe01240
Biosynthesis of cofactors
Module
sfe_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SFxv_2587 (menD)
Enzymes [BR:
sfe01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
SFxv_2587 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ADA74692
UniProt:
D2AFX0
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Position
complement(2429276..2431135)
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AA seq
619 aa
AA seq
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MLARALSVVPTPSKSGRKSTTKRQGCVLYYKWNSNESHHYRFISIIYFCSSLYLAAILIP
DKLMSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERG
LGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGAN
QAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGE
MDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKV
ALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQW
QASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAM
QAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASG
IDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSL
LPTPQSERERFYLMPQNVHFEHAAAMFELKYHHPQNWQELETAFADAWRTPTTTVIEMVV
NDTDGAQTLQQLLAQVSHL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgcgggcattgtccgtggttccgaccccgagcaagagtggcaggaaatcgaca
acaaagcggcagggctgcgtactttattacaaatggaatagtaatgagtcgcatcattac
cgattcatatcaataatctatttttgtagctccttatacttagccgcaatattgataccg
gacaaactcatgtcagtaagcgcatttaaccgacgctgggcggcggtcattctggaagca
ttaacgcgtcacggcgtcagacacatctgtatcgccccaggctcgcgttctacaccgtta
acgttagcggcggcggagaattccgcattcattcaccacacccatttcgatgagcgtggg
ttggggcatctggcgctggggctggcgaaagtcagcaagcagccggtggcggtgattgtg
acctccggcacggcggtggcaaatctctatccggcactgattgaagccgggttaaccgga
gaaaaactgattctcttaaccgccgatcgcccgccggagctaattgactgcggcgcgaat
caggcaattcgccagccgggaatgttcgcctctcaccccacgcacagtatttcattgccg
cgcccgacccaggatatccccgcacgttggctggtttctaccatcgaccacgctctcggt
acgcttcatgcggggggagtccatatcaactgcccgtttgctgaaccgctgtatggcgaa
atggacgataccgggcttagctggcaacagcgtctgggtgactggtggcaggacgacaaa
ccgtggctgcgtgaagcgcctcgtctggaaagtgaaaaacagcgcgactggttcttctgg
cgacaaaagcgcggcgtggtggttgccgggcgcatgagtgcggaagagggcaaaaaagtt
gccctgtgggcgcaaactcttggctggccgctgattggcgatgtgctgtcacaaaccggg
cagccgctgccgtgtgccgatctttggttaggcaatgccaaagcgaccagcgagctgcag
caggcgcaaattgtggtgcaactgggaagtagcctgacggggaaacggctcctgcaatgg
caggcaagctgtgaaccagaagagtactggattgttgatgacattgaagggcgacttgat
ccggcacaccatcgcggacgtcgcttaattgccaatattgccgactggctggagctgcat
ccggcagaaaaacgccagccctggtgcgttgaaatcccgcgcctggcggaacaggcaatg
caggcggttattgcccgccgtgatgcgtttggcgaagcgcaactggcgcatcgcatcagc
gactatctgcctgaacaggggcaattgtttgttggtaacagcctggtggtacgtctgatt
gatgcgctttcgcaacttccggcaggttacccggtgtacagcaaccgaggggccagcggt
atcgacggactgctttcgaccgccgcaggcgttcagcgggcaagcggcaaaccgacgctg
gcgattgtgggcgatctctccgcgctttacgatctcaacgcgctggcgttattgcgtcag
gtttctgcgccgctggtattaattgtggtgaacaacaacggcgggcaaattttctcgctg
ttgccaacgccgcaaagcgagcgtgagcgtttctatctgatgccgcaaaacgtccatttt
gagcacgccgccgcgatgttcgagctgaaatatcatcatccgcaaaactggcaggaactt
gaaacggcatttgccgacgcctggcgcacgccaaccaccacggtgattgaaatggtggtt
aacgacaccgatggtgcgcaaacgctccagcaacttctggcgcaggtaagccatttatga
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