Shigella flexneri 2002017 (serotype Fxv): SFxv_3243
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Entry
SFxv_3243 CDS
T01883
Symbol
speC
Name
(GenBank) Ornithine decarboxylase isozyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00330
Arginine and proline metabolism
sfe00480
Glutathione metabolism
sfe01100
Metabolic pathways
sfe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFxv_3243 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SFxv_3243 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SFxv_3243 (speC)
Enzymes [BR:
sfe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SFxv_3243 (speC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADA75289
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Position
complement(3088907..3091102)
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AA seq
731 aa
AA seq
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MGQGFPPCPVFLLPRNGFALMKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITA
ADSRSGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLL
PPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGD
LLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNH
HGALIQAGTTPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFRLTII
QLGTYDGTVYNARQVIDTIGHLCDYILFDSAWVGYEQFISMMADSSPLLLELNENDPGIF
VTQLVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVN
AKIHEGESGRRLWAECVELGIESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRR
FFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGINAETGEYSDFGVPATILAHYLRENG
IVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHIEDDSSLAEVLPSVYNKYPVRYR
DYTLRQLCQEMHDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDA
EGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDAD
GMKRLYGYVLK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggggcagggttttccaccttgtccggtattcttacttccccgaaacgggtttgcgctt
atgaaatcaatgaatattgccgccagtagtgaactggtatcccgactttcttctcatcgc
cgcgtggtggcgttgggagatactgattttacggacgtcgcggcagtcgtcattaccgct
gcggatagtcgcagtggcattcttgcgttgcttaagcgcaccggttttcatctaccggtg
tttttgtattccgaacatgctgttgaattacctgcgggcgttacggcggtaatcaacggc
aacgagcagcagtggctggagctggaatccgcagcctgtcagtatgaagagaatttgctg
ccaccgttttatgacacgctgacgcagtacgttgagatgggcaacagcacctttgcttgc
cctggacatcaacatggtgcgttctttaaaaagcatcctgccggacgccatttttacgat
ttctttggtgagaacgtctttcgcgccgatatgtgtaacgctgacgtaaaattgggcgat
ctgcttattcatgaaggatcggcgaaagatgcgcagaaattcgcagccaaagtctttcat
gccgataaaacctattttgtgctgaacggcacatcggcagcgaataaagtggtgacgaat
gcgctgttaacgcgtggcgatctggtgctcttcgaccgtaacaaccataagtcgaatcat
cacggcgcgctgattcaggcggggacgacgccggtctatctggaagcttcacgtaacccg
tttggtttcattggcggtattgatgcgcactgttttaatgaagagtatctgcgccagcaa
attcgcgacgttgcgccagaaaaagccgacctgccgcgcccgtttcgcctgacgattatt
cagctgggaacctatgacggcactgtctataacgcccgtcaggtgatcgataccattggg
catctgtgtgattacattctgtttgattccgcgtgggtcggttacgaacagtttatctcg
atgatggcggatagctcgccgctgctgttagaacttaacgaaaacgatccggggattttt
gtgacccagttggtgcacaaacagcaggctggattctcacagacgtcgcagatccataaa
aaagataaccatatccgcggacaggcgcgtttttgcccgcataagcggttgaataacgcc
tttatgctccatgcttctaccagccctttctatccgctgtttgctgcactggatgttaac
gccaaaattcatgaaggggagagtgggcgtcggctgtgggctgagtgcgttgagttgggt
attgagtcgcgcaaggctattcttgcgcgctgtaagctgttccgcccgtttatcccgccc
gttgttgatggcaaattgtggcaggattatccgacatcagtgttagccagcgaccgccgt
tttttcagttttgagccgggggcgaagtggcacggctttgaaggatatgccgcggatcag
tattttgttgatccgtgcaagctgttactcactacaccaggtatcaatgccgaaaccggc
gaatatagcgactttggcgttccggcgacgattctggcgcactatctgcgtgagaacggc
attgtgccggagaagtgcgatctcaactccattctgttcttattaactccggcggaaagc
cacgagaagctggcacaactggtggcgatgctggcgcaatttgaacagcatattgaggat
gactcgtcgctggctgaggtgttgccgagcgtttataacaaatatccggtgcgctatcgc
gactacaccctgcgccagttgtgtcaggagatgcacgatctgtatgtcagtttcgacgtc
aaagacctacaaaaagcgatgttccgccagcagagtttcccgtcagtggtgatgaacccc
caggatgcgcatagcgcttatattcgcggtgaagtggagttggtgcggattcgtgatgcc
gaagggcgaattgcggcagaaggggcgttgccttatccacctggcgtgctttgcgtggta
cccggggaagtctggggtggggcggttcaacgttatttccttgcgctggaagaaggcgtg
aatttgttgccgggattttcgccggagttgcaaggtgtctatagcgaaaccgatgcggat
ggcatgaaacgattgtacggttatgtgttgaagtaa
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