Shigella flexneri 2002017 (serotype Fxv): SFxv_4001
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Entry
SFxv_4001 CDS
T01883
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00540
Lipopolysaccharide biosynthesis
sfe01100
Metabolic pathways
Module
sfe_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SFxv_4001 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfe01005
]
SFxv_4001 (waaA)
Enzymes [BR:
sfe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SFxv_4001 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SFxv_4001 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
SFxv_4001 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
SFxv_4001 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
sfe01005
]
Lipid A
SFxv_4001 (waaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_4
PCC_BT
Motif
Other DBs
NCBI-ProteinID:
ADA75980
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All DBs
Position
3811054..3812331
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AA seq
425 aa
AA seq
DB search
MLELLYTALLYLIQPLIWIRLRVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGE
TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNK
VDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLI
AAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST
HEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTS
TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
RLEQASGLITVTDATTLAKEVSSLLTDAVYRSFYGRHAVEVLYQNQGALQRLLQLLEPYL
PPKTH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaattgctttacaccgcccttctctaccttattcagccgctgatctggatacgg
ctccgggtgcgcggacgtaaggctccggcctatcgaaaacgctggggtgaacgttacggt
ttttaccgccatccgctaaaaccaggcggcattatgctgcactccgtctccgtcggtgaa
actctggcggcgatcccgttggtgcgcgcgctgcgtcatcgttatcctgatttaccgatt
accgttacaaccatgacgccaaccggttcggagcgcgtacaatcggctttcgggaaggat
gttcagcacgtttatctgccgtatgacctgcccgatgcgctcaaccgtttcctgaataaa
gtcgaccccaaactggtgttgattatggaaaccgaactatggcctaacctgattgcggcg
ctacataaacgtaaaattccgctggtgatcgctaacgcgcgactctctgcccgctcggcc
gcaggttatgccaaactgggtaaattcgtccgccgcttgctgcgtcgtattacgctgatt
gctgcgcaaaatgaagaagatggtgcacgttttgtggcgctgggcgcaaaaaataaccag
gtaaccgttaccggtagcctgaaattcgatatttctgtaactccgcagttggctgctaaa
gccgtgacgctacgccgccaatgggcaccacaccgcccggtatggattgccaccagcact
cacgaaggtgaagagagcgtggtcattgccgcacatcaggcattgttacagcaattcccg
aatttattgctcatcctggtaccccgtcatccagaacgcttcccggatgcgattaacctt
gtccgccaggctggactaagctatatcacacgctcttcaggggaagtcccctccaccagc
acgcaggttgtggttggcgatacgatgggcgagttgatgttactgtacggcattgccgat
ctcgcctttgttggcggttcactggttgaacgtggtgggcataatccgctggaagctgcc
gcacacgctattccggtattgatggggccgcatacttttaactttaaagacatttgcgcg
cggctggagcaggcaagcgggcttattaccgttaccgatgccactacgcttgcaaaagag
gtttcctctttactcaccgacgccgtttaccgtagtttctatggccgtcatgccgttgaa
gtactgtatcaaaaccagggcgcgctacagcgtctgcttcaactgctggaaccttacctg
ccaccgaaaacgcattga
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