Shigella flexneri 2002017 (serotype Fxv): SFxv_4234
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Entry
SFxv_4234 CDS
T01883
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe00300
Lysine biosynthesis
sfe00470
D-Amino acid metabolism
sfe01100
Metabolic pathways
sfe01110
Biosynthesis of secondary metabolites
sfe01120
Microbial metabolism in diverse environments
sfe01230
Biosynthesis of amino acids
Module
sfe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFxv_4234 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SFxv_4234 (dapF)
Enzymes [BR:
sfe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SFxv_4234 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ADA76186
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Position
4046196..4047023
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AA seq
275 aa
AA seq
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MMQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH
YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG
EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL
ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLDEEVR
VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggta
acgcagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctgggg
gtagggtttgaccagctgctggtggttgagccgccgtatgatcctgaactggattttcac
tatcgcattttcaatgctgatggcagtgaagtggcgcagtgcggtaacggtgcgcgctgc
tttgcccgttttgtgcgtctgaaaggactgaccaataagcgtgatatccgcgtcagcacc
gccaacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggc
gaacccaacttcgaaccttccgccgtgccgtttcgcgctaacaaagcggaaaagacctat
attatgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccgcat
tgcgtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctg
gaaagtcacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgc
gagcatattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagc
ggcgcgtgtgcggcggtggcggtagggattcagcaaggtttgctggacgaagaagtacgc
gtggaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatat
atgactggcccggcggtacatgtctacgatggatttattcatctatga
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