Shigella flexneri 2002017 (serotype Fxv): SFxv_4686
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Entry
SFxv_4686 CDS
T01883
Symbol
groL
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Pathway
sfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFxv_4686 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfe03019
]
SFxv_4686 (groL)
03110 Chaperones and folding catalysts [BR:
sfe03110
]
SFxv_4686 (groL)
03029 Mitochondrial biogenesis [BR:
sfe03029
]
SFxv_4686 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfe04147
]
SFxv_4686 (groL)
Enzymes [BR:
sfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SFxv_4686 (groL)
Messenger RNA biogenesis [BR:
sfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SFxv_4686 (groL)
Chaperones and folding catalysts [BR:
sfe03110
]
Heat shock proteins
HSP60 / Chaperonin
SFxv_4686 (groL)
Mitochondrial biogenesis [BR:
sfe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SFxv_4686 (groL)
Exosome [BR:
sfe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SFxv_4686 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SFxv_4686 (groL)
Exosomal proteins of breast cancer cells
SFxv_4686 (groL)
Exosomal proteins of colorectal cancer cells
SFxv_4686 (groL)
Exosomal proteins of bladder cancer cells
SFxv_4686 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADA76591
LinkDB
All DBs
Position
4518355..4520001
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccaaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaatatgggtgcgcagatggtgaaagaagttgcctccaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaaccgtactggctcaggctatcatc
actgaaggtctgaaagctgttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagcggttaccgctgcagttgaagaactgaaagcgctgtccgtaccgtgctctgat
tctaaagcgattgctcaggttggtaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagctgtt
gccaaagcaggcaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcgctagca
actctggttgttaacaccatgcgtggcatcgtgaaagttgctgcggttaaagctccgggc
ttcggcgatcgtcgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccactatcatcgatggcgtgggtgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtcctgaactgcggcgaa
gaaccgtctgttgttgctaacaccgttaaaggcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgacatgggtatcctggacccaaccaaagtaacc
cgttctgctctgcagtacgcagcttctgtggctggcctgatgatcaccaccgaatgcatg
gttaccgacctgccgaaaaacgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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