Streptococcus ferus: NCTC12278_00297
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Entry
NCTC12278_00297 CDS
T07132
Symbol
pbpD
Name
(GenBank) membrane carboxypeptidase, penicillin-binding protein 1b
KO
K03693
penicillin-binding protein 1B
Organism
sfer
Streptococcus ferus
Pathway
sfer00550
Peptidoglycan biosynthesis
sfer01100
Metabolic pathways
sfer01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC12278_00297 (pbpD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC12278_00297 (pbpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfer01003
]
NCTC12278_00297 (pbpD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfer01011
]
NCTC12278_00297 (pbpD)
Glycosyltransferases [BR:
sfer01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NCTC12278_00297 (pbpD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sfer01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NCTC12278_00297 (pbpD)
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Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
SQF39354
UniProt:
A0A2X3VD51
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All DBs
Position
1:279986..282451
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AA seq
821 aa
AA seq
DB search
MSKWKKIDFSKIKQLRLRKPDIKKWKWETFRLDRLKQIKLKKPDLTKLKALNFASVKEII
QAQRQKMSDKDFSAWDIGSVFLRTFKLLSNFFYIILLLVFFLGAGLGFGYLASQVESVKV
PSKAKLVKEVNTLTRISQINYSNGSLISKIDTDLLRTPVKSDAISDNVKKAVIATEDENF
KEHQGVVPKAVFRATIGSLLGVGESSGGSTLTQQLIKQQILGDDPTFKRKTKEIIYALAL
ERYMSKDDILTDYLNVSPFGRNNKGQNIAGVEEAARGIFNVSAKQLTVPQAAYIAGLPQS
PIAYSPYRADGRFKSKEDLALGLKRAQNVLYNMYRTGVLSKEDYESYRKYDISKDFRQPE
TAQSQTHDFLYYSAMEEAQKAMYQYLIKRDKVSSQDLKNDTTKEAYQKLAEQELRLGGYT
VKTTINQKVYAAMQTAVQQHGGSLDDGTGRVEVGNVLLNNETGAVIGFIGGRDYETNQNN
HAFDTARSPGSSIKPILAYGPAIDQGIMGSASIVSNYPTTYSSGQKILHVGDEGTTMMTL
QEALNKSWNIPAFWTYQTLLEKGVDVQSYMEKMGYSIPEYNIESLPLGGGVETTVAQQSN
GYQTIANGGVYQPYYMIEQITASDGTVVYKHESKPVTVYSKAAASIMSDLLKGPISSGDT
TTFKSKLGAINSGLANADWTGKTGTTENYSDVWLVLSTPQVTLSGWAGHDDNTSLASMTG
YNNNAQYMAQLVNAINQADPNVLGTNRRFGLDGSVIKAEVLKSTGLKPATVNVNGRSVSL
DGDKVTSYWAKNGPGDTTYKFAIGGTDSDYQKAWASILGSR
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatggaaaaaaattgatttttcaaagataaagcagcttcgtctcagaaagcct
gatattaagaaatggaaatgggagacctttcgtcttgaccgattaaaacagataaaactg
aagaaaccagacctaacaaaactgaaagcattgaattttgcttctgttaaggaaatcatc
caggctcagcgtcaaaaaatgtctgataaagattttagcgcctgggatataggttcggtc
tttttacgcaccttcaaactgttatcgaactttttttacattattcttctgctcgtattt
ttcttaggagcaggtcttggttttggttatttagccagtcaggtcgaaagtgtcaaggtg
cccagtaaggccaaattagttaaagaggttaataccttaactcgaatctcacaaatcaac
tattcaaatgggagcttaatttctaagattgatacggatttgttgaggacgccagtcaaa
agtgacgccatctccgataatgtcaaaaaggctgttattgccaccgaagatgaaaatttt
aaagaacaccaaggggttgttcctaaggcggtgtttagggcaacgataggctccttgcta
ggagttggtgaaagcagcggagggtcaacgctgacgcagcagcttattaaacagcaaatt
ttgggagatgacccgactttcaagcgtaaaaccaaagagattatttatgctttggcgctt
gagcggtatatgtccaaagatgatattctaacggattacttaaatgtatcgccctttgga
agaaataataaagggcaaaatattgcaggggttgaagaagcagctaggggcatttttaat
gtttctgccaagcaattaacggtgcctcaggcagcctatattgcaggcttgccgcaaagt
ccgattgcctattctccttatagggctgatgggcggtttaaaagcaaggaagacttggct
ttggggctcaaacgggcacaaaacgttctttacaatatgtatcggacaggtgtgctgtca
aaagaagattatgagtcttaccgcaagtatgacatcagtaaagattttaggcaacctgag
acagctcaatctcagacacatgactttttatattactcagctatggaagaggctcaaaaa
gccatgtaccaatatctgatcaaaagagataaggtatcatcacaagacctcaaaaatgac
actacaaaagaggcttatcaaaaattagcagaacaggagctccgtttgggcggttatacc
gttaaaacaacaatcaatcagaaagtttatgccgcgatgcagacagctgttcagcagcat
ggcggttctctagatgatggaacaggcagggttgaggttggtaatgtgctgctcaacaat
gaaacaggtgcggttattggttttatcggtggaagagactatgaaaccaaccaaaataat
catgcctttgacacggcacgttcaccaggatcaagtattaaaccgattttagcctatggg
ccagccattgatcagggaattatggggtcggccagtattgtctccaattacccaaccacc
tattccagcggtcagaagattcttcacgttggcgatgaggggacaacgatgatgacgctg
caagaagccctcaacaagtcttggaatatccctgccttttggacttatcagaccctactg
gaaaaaggggtagacgttcagtcctacatggagaagatgggttacagtattcctgagtac
aatattgagagtcttcctctagggggaggtgttgagacaacggttgctcagcagtctaac
ggctatcaaaccattgccaatggtggtgtttatcagccttattatatgattgagcaaatc
actgctagtgacggcaccgtggtttataaacatgagtctaagccggtaacggtctattct
aaggcagcagccagcatcatgagtgacctgctaaaagggccgataagctcaggagacacg
acgacctttaagagtaagttgggagctatcaattctgggttagccaatgctgattggaca
ggtaagacgggaacgactgaaaactattcggatgtttggctcgttttatccactccgcag
gtgacactaagtggctgggctggtcatgatgacaatacttccttagcctccatgacgggt
tataacaataatgcgcagtatatggcacagcttgttaatgccatcaaccaagcagatcca
aatgtcttgggaaccaataggcgttttggcttggacggcagtgtgataaaggcagaagtg
ttaaaatctaccggtttaaagccggccacagttaatgtcaatgggcgcagtgtttcttta
gatggcgataaggtaaccagttactgggctaaaaatggaccaggagatacgacctataaa
tttgcaatcggaggaacagacagcgattaccaaaaggcatgggccagcatcttaggaagc
agataa
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