Streptococcus ferus: NCTC12278_00436
Help
Entry
NCTC12278_00436 CDS
T07132
Symbol
rny
Name
(GenBank) Hydrolase (HAD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sfer
Streptococcus ferus
Pathway
sfer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12278_00436 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfer03019
]
NCTC12278_00436 (rny)
Messenger RNA biogenesis [BR:
sfer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC12278_00436 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_NusA_2nd
KH_KhpA-B
KH_2
G0-G1_switch_2
LMBR1
dUTPase
UPF0242
Motif
Other DBs
NCBI-ProteinID:
SQF39582
UniProt:
A0A2X3XYQ8
LinkDB
All DBs
Position
1:416857..418464
Genome browser
AA seq
535 aa
AA seq
DB search
MGNMIIGLVFALIGLVIGYVVVSAKMKSAKDTAELTLLNAEQEAVNARSKAEAEAEHIRT
TAERESKAHKKELLLEAKEEARKYREEIEKEFKSERQELKQMETRLTERASSLDRKDENL
ASKEKMLDSKEQSLTDKSRHIDEREEQVSQLELKKTEELEKVASLTQDEARNIILSDTEK
KLTHEIASRIKEADREVKDRVDKNAKNLLAQAMQRLAGDYVTEQTITSVHLPDDNMKGRI
IGREGRNIRTLESLTGIDIIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAFEIGAPNLHPDLIKLMGRLQFRTSYGQNVLRHSVEVGK
LAGLLASELGENVDLARRAGFLHDMGKAIDREVEGSHVEIGTEFARKYKEHPIVVNTIAS
HHGDVEAESVIAVLVATADALSSARPGARNESMENYIKRLRDLEEIATSFEGVQNSFALQ
AGREIRIMVQPQKISDDQVTILAHDVREKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatgattattggtcttgtttttgcactcattggtttggttataggttatgtg
gttgtttcggcgaaaatgaaatccgctaaagatactgcagaactgactcttttaaacgct
gaacaggaggctgtcaatgcgagaagcaaggctgaggctgaagctgagcatattagaacg
acagctgagcgtgagagcaaggcccataaaaaggaattgcttttagaggcgaaagaagag
gctagaaaatatcgtgaagagattgaaaaagaatttaagtctgaaagacaagagttgaaa
cagatggaaacacgcttaacagagcgtgcttcttctcttgaccgtaaagatgagaatcta
gcaagtaaagaaaaaatgctcgatagtaaagagcagagtctaaccgataaatctagacat
attgatgagcgtgaagaacaagtatcacagttagaactgaaaaaaactgaggaacttgag
aaagtagcatcattgacacaggatgaggctcgcaatatcatcctgtcagatacggaaaag
aaactgacacatgaaattgcaagccgtatcaaagaagccgatcgtgaagttaaagatcgc
gttgataaaaatgcaaaaaatctgcttgcccaagccatgcagcgtttggctggcgattat
gtgacggaacagaccattacaagtgttcatctaccagatgacaatatgaagggacggatt
atcggtcgcgaaggccgtaatatccgaacactggaaagtttgacagggattgatattatc
atcgatgatacacctgaagtagtggtgctttcaggctttgatcctatccgtcgtgagatc
gccagaatgactctggaagcccttattcaagatggtcgtatccatcctgcccgtatcgaa
gaactggttgagaaaaatcgtttggaaatggataatcgtattcgtgaatacggtgaagca
gctgcttttgagataggggcacctaatctgcatccagacctgattaagctgatgggccgt
ctgcagtttagaacctcttatggacaaaatgtgttgcgccactcggtcgaggttggtaaa
ttagctggtcttctggcaagtgagctgggtgaaaatgttgatttggcaagacgtgcaggc
ttcctccatgatatggggaaagccattgaccgtgaagttgagggcagccacgttgaaatc
ggaacagaatttgctcgtaagtataaagagcatcctattgttgttaatacgattgccagc
caccatggtgatgttgaggccgaatcggtcattgctgtcttggtagctaccgcagatgcc
ttgagttcagcccgtcctggtgctcgaaatgagtctatggaaaactacattaagcggctt
cgtgaccttgaggagattgcaacgagttttgaaggtgttcagaacagttttgccctgcag
gctggacgcgaaattcgtatcatggttcagccacagaaaatttcagatgatcaggtgacg
attttggcacatgatgttcgtgagaaaattgaaaataatttagattatccgggtaacatt
aaagtgaccgttatccgtgagctgcgtgcggttgactacgcaaaataa
DBGET
integrated database retrieval system
