Streptococcus ferus: NCTC12278_00439
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Entry
NCTC12278_00439 CDS
T07132
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sfer
Streptococcus ferus
Pathway
sfer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12278_00439 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfer03400
]
NCTC12278_00439 (priA)
Enzymes [BR:
sfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12278_00439 (priA)
DNA repair and recombination proteins [BR:
sfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12278_00439 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
PriA_3primeBD
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
TrwB_AAD_bind
SLFN-g3_helicase
Cas3-like_C_2
Zn_ribbon_6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SQF39585
UniProt:
A0A2X3VPD9
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All DBs
Position
1:419539..421923
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AA seq
794 aa
AA seq
DB search
MGQIAQVIVDIPLMQTDRPFSYAVPEQLSGQLQPGSRVHVPFGKGNRLMQGFVLSLHEGD
TEALKAVADSLDFEPVLNEEQLDLANQMRKTVFSYKISILKSMVPNLLNSEYDKLLKPKD
TLSVADRESIFTSKTEMVFSKLRPEQQEKARLLVQQDKIEVTYLARDKKTVKKEKHYQVN
QEKLQQVEISSRAKKRQALKSFLQEHPQEGLLSGLYQQFSREQVKFFIEAGAVSLFEVEL
SRTAAYFDEVQKTDALSLNKEQEAIVNQLTAAIGKSDTPYLLEGITGSGKTEVYLQLIDK
VLELGKTAIVLVPEISLTPQMTHRFISRFGHRVAIMHSGLSDGEKFDEWRKIKSGQARVV
VGARSAIFAPLENIGAIIIDEEHEASYKQESNPRYHARDVALLRAKHHKAVLLLGSATPS
IESRARASRDVYHFLQLKHRANPRAKIPQVEILDFRDYIGKQTSTNFTPVLVAKIKERLE
RKEQVVLMLNRRGYSSFIMCRECGYVDQCPNCDISLTLHMDTKTMNCHYCGFSKLIPRNC
PNCQSASIRYYGTGTQKAYDELMELVPQARVLRMDVDTTRKKGAHQKILDQFGRHEADIL
LGTQMIAKGLDFPDVTLVGVLNADTSLNLPDFRSSERTFQLLTQVAGRAGRADKPGEVLI
QTYNPNHYAIQLAKEQDYEAFYRYEMGIRRQLSYPPYYFTVGLTLSHKDEAFLVRKAYDV
LGMLKQDLSDKVTFLGPTAKPVARTHNLYHYQIIIKYRFEERLEASLNQVLDWTQEKENR
ELRLSIDQEPQSFM
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggacagattgctcaagtgattgttgatatacctttgatgcagacagataggcccttt
tcctatgctgttcccgaacagctgagcgggcagcttcagccgggatcgcgggttcatgtt
ccttttggaaaaggaaacaggctcatgcagggctttgttctatccctgcatgaaggggat
actgaggctttaaaggcagttgctgacagcttggattttgaacctgttctgaatgaggaa
cagcttgacttagctaatcagatgcgaaagacggttttttcctacaagatttctatccta
aaatccatggtccccaacttgctgaattcagaatacgataaactgcttaagccgaaagac
actctatctgtggccgacagagaaagcatttttacttccaagaccgaaatggttttttca
aaactccgtccagaacagcaggaaaaggcaaggctccttgttcagcaggataagatagag
gtaacctatcttgccagagataaaaaaacggtgaaaaaggagaaacattatcaagtcaat
caggaaaaactccagcaagttgagattagcagcagggctaaaaaacgtcaggcgctgaag
tcttttttgcaggagcatccgcaagaggggcttttgtcaggtttataccagcagttttcc
agagaacaggttaaattttttatagaagctggagctgtaagcctttttgaagtggagctg
agccgcacagcggcctattttgatgaagtccaaaaaacagatgcactgtctttaaataag
gaacaagaagctattgtaaaccaattaacggcagctattggaaaatcagacactccttat
ttgctagaaggaattaccggaagcgggaagaccgaagtttacttgcagctgattgacaag
gttttggaattgggaaagaccgctattgttttggtaccggagatttccctaaccccgcaa
atgacgcatcgttttatttctcgttttggccatcgggttgcgattatgcattcaggtttg
tcggatggggaaaaatttgatgaatggcggaagattaaatctggtcaggccagagttgtt
gttggcgcgagatcggctatttttgcgcctttggaaaatattggtgcaattattattgat
gaagagcatgaggctagctataaacaggagtcaaatcctcgctaccatgcgagagatgtg
gcacttttgagagcaaagcatcacaaggcagttcttttattggggagtgcgacacctagt
attgagagtcgggcgcgtgccagccgggatgtttatcattttttgcagttaaaacaccgc
gccaatcccagagctaagattccccaagtggagattcttgattttagggattatatcggt
aagcaaacgtcaactaattttacgccagtcttggtggcgaagattaaggaacggttagag
cgcaaagaacaagttgttctgatgcttaatcgcagaggctattccagttttatcatgtgc
cgcgagtgcggctatgtggatcaatgtccgaattgtgatatttccttgaccttgcatatg
gacacaaagaccatgaattgccattactgcggtttttccaaattgattcccagaaactgt
cctaattgtcaaagcgccagtattcgatattatggtacagggactcaaaaggcctacgat
gagcttatggaattagttcctcaagctagggttttgcgcatggatgtggatacgacccgc
aaaaaaggggctcaccagaaaatccttgatcaatttggccgacatgaggctgatattttg
ttgggcactcagatgattgccaaaggccttgattttcctgatgtcaccttggtaggggtc
ttaaatgcagatacttccttgaatctgcctgattttcgttctagtgagagaacctttcag
ctcctgacccaagtggctggtcgagccggccgagctgataaaccaggggaggttttgatt
cagacctataaccctaatcactatgcgattcaattggccaaagagcaggattatgaggcc
ttttatcgctatgaaatggggattcgccgtcagttatcctatcccccctattattttacg
gtagggttaaccctttcgcacaaggacgaagcttttctcgtccgaaaggcctatgatgtt
ttgggcatgctgaagcaagatctgtcggataaggtgacatttttagggccaacggctaag
cccgttgcaaggacacataacctttatcattatcagattattattaaataccgttttgaa
gagcgcttggaagctagtcttaatcaagttttagattggacacaggaaaaagagaatagg
gagctgcgcttgagtattgatcaagagccgcaaagtttcatgtga
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integrated database retrieval system
